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Mmp27
Gene Detail
 Symbol
Name
ID
Mmp27
matrix metallopeptidase 27
MGI:3039232
Synonyms LOC234911
Feature Type protein coding gene
Genetic Map
Chromosome 9
2.46 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr9:7571396-7581885 bp, + strand
From VEGA annotation of GRCm38

  10490 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:23345  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken

Protein SuperFamily: matrix metalloproteinase, stromelysin type
Gene Tree: Mmp27

Human
homologs
Human Homolog MMP27, matrix metallopeptidase 27
NCBI Gene ID 64066
neXtProt AC  NX_Q9H306
Human Synonyms  MMP-27
Human Chr (Location)  11q24; chr11:102691684-102705737 (-)  GRCh38
Alleles
and
phenotypes
All alleles(2) : Targeted(2)
Gene Ontology
(GO)
classifications
All GO classifications: (6 annotations)
Process proteolysis
Component cellular_component
Function hydrolase activity, metal ion binding, ...
External Resources: FuncBase
Expression
cDNA source data(3)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(4) cDNA(3) Other(1)
Microarray probesets(1)
Other database
links
VEGA Gene ModelOTTMUSG00000031478 (Evidence)
Ensembl Gene ModelENSMUSG00000070323 (Evidence)
Entrez Gene234911 (Evidence)
UniGene334940
DoTSDT.101302082, DT.110627970
NIA Mouse Gene IndexU192456
Consensus CDS ProjectCCDS40530.1
International Mouse Knockout Project StatusMmp27
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000031478 VEGA Gene Model | MGI Sequence Detail 10490 C57BL/6J ±  kb
transcript OTTMUST00000077986 VEGA | MGI Sequence Detail 1654 Not Applicable 
polypeptide OTTMUSP00000041377 VEGA | MGI Sequence Detail 551 Not Applicable 

For the selected sequences
All sequences(32) RefSeq(6) UniProt(3)
Polymorphisms SNPs within 2kb(49 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR018486 Hemopexin, conserved site
InterPro IPR000585 Hemopexin-like domain
InterPro IPR018487 Hemopexin-like repeats
InterPro IPR024079 Metallopeptidase, catalytic domain
InterPro IPR021190 Peptidase M10A
InterPro IPR021158 Peptidase M10A, cysteine switch, zinc binding site
InterPro IPR016293 Peptidase M10A, metazoans
InterPro IPR001818 Peptidase M10, metallopeptidase
InterPro IPR006026 Peptidase, metallopeptidase
InterPro IPR002477 Peptidoglycan binding-like
Protein Ontology PR:000010486 matrix metalloproteinase-27
References (Earliest) J:89162 Nuttall RK, et al., Expression analysis of the entire MMP and TIMP gene families during mouse tissue development. FEBS Lett. 2004 Apr 9;563(1-3):129-34
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(24)
Other
accession IDs
MGI:2685026

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory