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Cxcl3 Gene Detail
Summary
  • Symbol
    Cxcl3
  • Name
    chemokine (C-X-C motif) ligand 3
  • Synonyms
    Dcip1
  • Feature Type
    protein coding gene
  • IDs
    MGI:3037818
    NCBI Gene: 330122
  • Alliance
  • Transcription Start Sites
    8 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:90786101-90788093 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 44.78 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    25 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3037818
protein coding gene Chr5:90786101-90789600 (.)
129S1/SvImJ MGP_129S1SvImJ_G0029729
protein coding gene Chr5:91876988-91881626 (+)
A/J MGP_AJ_G0029695
protein coding gene Chr5:88250982-88254587 (+)
AKR/J MGP_AKRJ_G0029641
protein coding gene Chr5:91113053-91116536 (+)
BALB/cJ MGP_BALBcJ_G0029705
protein coding gene Chr5:89151709-89157549 (+)
C3H/HeJ MGP_C3HHeJ_G0029428
protein coding gene Chr5:91531678-91536001 (+)
C57BL/6NJ MGP_C57BL6NJ_G0030159
protein coding gene Chr5:95549054-95552551 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0027395
protein coding gene Chr5:83955520-83958995 (+)
CAST/EiJ MGP_CASTEiJ_G0028838
protein coding gene Chr5:90906018-90909307 (+)
CBA/J MGP_CBAJ_G0029398
protein coding gene Chr5:98821065-98824560 (+)
DBA/2J MGP_DBA2J_G0029542
protein coding gene Chr5:88325472-88329085 (+)
FVB/NJ MGP_FVBNJ_G0029501
protein coding gene Chr5:87187522-87191014 (+)
LP/J MGP_LPJ_G0029630
protein coding gene Chr5:92255619-92260707 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0029530
protein coding gene Chr5:103805182-103808630 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0030193
protein coding gene Chr5:90654261-90658685 (+)
PWK/PhJ MGP_PWKPhJ_G0028557
protein coding gene Chr5:87384644-87388104 (+)
SPRET/EiJ MGP_SPRETEiJ_G0028392
protein coding gene Chr5:90073059-90077463 (+)
WSB/EiJ MGP_WSBEiJ_G0028917
protein coding gene Chr5:91113030-91117592 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
  • All Mutations and Alleles
    6
  • Chemically induced (other)
    2
  • Radiation induced
    1
  • Spontaneous
    1
  • Targeted
    2
  • Genomic Mutations
    4 involving Cxcl3
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 330122 NCBI Gene Model | MGI Sequence Detail 1993 C57BL/6J ±  kb
transcript NM_203320 RefSeq | MGI Sequence Detail 1018 C57BL/6  
polypeptide Q6W5C0 UniProt | EBI | MGI Sequence Detail 100 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 8
    cDNA 8

    Microarray probesets 2
References
more
  • Summaries
    All 33
    Gene Ontology 6
    Phenotypes 9
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:239924 Krausgruber T, et al., T-bet is a key modulator of IL-23-driven pathogenic CD4(+) T cell responses in the intestine. Nat Commun. 2016 May 19;7:11627

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory