D030068K23Rik Gene Detail

Summary

• Symbol
  D030068K23Rik
• Name
  RIKEN cDNA D030068K23 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:3037424
  NCBI Gene: 628686
• Alliance
  genome feature page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr8:109801854-109980271 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, 56.51 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  4617 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3037424	lncRNA gene	Chr8:109801842-110000443 (+)
129S1/SvImJ	ENSMUSG00200015116	lncRNA gene	Chr8:104102555-104301484 (+)
A/J	ENSMUSG00195021136	lncRNA gene	Chr8:104415742-104614690 (+)
AKR/J	ENSMUSG00220015524	lncRNA gene	Chr8:104558083-104757019 (+)
BALB/cJ	ENSMUSG00180026632	lncRNA gene	Chr8:104421442-104620374 (+)
C3H/HeJ	ENSMUSG00175025263	lncRNA gene	Chr8:104478187-104677102 (+)
C57BL/6NJ	ENSMUSG00215036383	lncRNA gene	Chr8:104082026-104280773 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0006718	lincRNA gene	Chr8:100176905-100370280 (+)
CAST/EiJ	ENSTCUG00005035711	lncRNA gene	Chr8:103831694-104020673 (+)
CBA/J	ENSMUSG00210035981	lncRNA gene	Chr8:104405415-104604292 (+)
DBA/2J	ENSMUSG00185005933	lncRNA gene	Chr8:110514383-110713308 (+)
FVB/NJ	ENSMUSG00205026257	lncRNA gene	Chr8:103390268-103589193 (+)
JF1/MsJ	ENSUMUG00000021605	lncRNA gene	Chr8:112847676-113046603 (+)
LP/J	ENSMUSG00230036907	lncRNA gene	Chr8:114194410-114393316 (+)
NOD/ShiLtJ	ENSMUSG00190028514	lncRNA gene	Chr8:104550182-104749077 (+)
NZO/HlLtJ	ENSMUSG00225023536	lncRNA gene	Chr8:117545134-117744047 (+)
PWK/PhJ	ENSLUMG00010028829	lncRNA gene	Chr8:104298325-104503138 (+)
SPRET/EiJ	ENSMSPG00010041600	lncRNA gene	Chr8:106382708-106584601 (+)
WSB/EiJ	ENSIUOG00005033171	lncRNA gene	Chr8:105206009-105404889 (+)

Homology

• Human Ortholog
  LINC01572, long independently transcribed non-coding RNA 1572

• Vertebrate Orthologs
  1

Vertebrate Orthology Source

Alliance of Genome Resources

• Human Ortholog
  LINC01572, long independently transcribed non-coding RNA 1572
  
• Links
  HGNC:51385

  NCBI Gene ID: 101927957

  
  
• Chr Location
  chr16:72236281-72665083 (-)  GRCh38

---

• MGI Vertebrate Homology
  D030068K23Rik stringent orthology
  1 human;1 mouse
  
• HCOP
  vertebrate homology predictions: LINC01572
• Gene Tree
  D030068K23Rik
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Endonuclease-mediated
  1
• Gene trapped
  1
• Find Mice (IMSR)
  2 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  5

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  48
• RefSeq
  1

• Ensembl
  ENSMUSG00000097393 (Evidence)
• NCBI Gene
  628686

Representative Sequences			Length	Strain/Species
genomic	628686	NCBI Gene Model | MGI Sequence Detail	178418	C57BL/6J
transcript	NR_126329	RefSeq | MGI Sequence Detail	3677	C57BL/6

Molecular
Reagents

• All nucleic 5

  cDNA 5

References

• Summaries
  All 9

  Phenotypes 2
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:389486 Mouse Genome Informatics and Ensembl Genome Database Project, MGI Strain Genome Feature and Gene Model Load from Ensembl. Database Release. 2026;

TSS for D030068K23Rik:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr79352	Chr8:109801840-109801856 (+)	-6 bp
Tssr79353	Chr8:109973942-109973946 (+)	172,090 bp