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Kcnt2
Gene Detail
Symbol

Name
ID
Kcnt2
potassium channel, subfamily T, member 2
MGI:3036273
Synonyms
E330038N15Rik
Feature Type
protein coding gene
Genetic Map
Chromosome 1
61.62 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr1:140246216-140612063 bp, + strand
From VEGA annotation of GRCm38

  365848 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:16121  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Kcnt2

Human
homologs
Human Homolog KCNT2, potassium channel, subfamily T, member 2
NCBI Gene ID 343450
neXtProt AC  NX_Q6UVM3
Human Synonyms  KCa4.2, SLICK, SLO2.1
Human Chr (Location)  1q31.3; chr1:196225779-196608560 (-)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(26) : Gene trapped(24) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Kcnt2 interacts with 310 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (1 records)
cDNA source data(1)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(1) cDNA(1)
Microarray probesets(2)
Other database
links
VEGA Gene ModelOTTMUSG00000029830 (Evidence)
Ensembl Gene ModelENSMUSG00000052726 (Evidence)
Entrez Gene240776 (Evidence)
DFCITC1728973, TC1623498
DoTSDT.55227290, DT.91402377
NIA Mouse Gene IndexU000886, U193455
Consensus CDS ProjectCCDS48389.1
International Mouse Knockout Project StatusKcnt2
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000029830 VEGA Gene Model | MGI Sequence Detail 365848 C57BL/6J ±  kb
transcript OTTMUST00000074033 VEGA | MGI Sequence Detail 3535 Not Applicable 
polypeptide OTTMUSP00000038401 VEGA | MGI Sequence Detail 1142 Not Applicable 

For the selected sequences
All sequences(70) RefSeq(27) UniProt(10)
Polymorphisms
SNPs within 2kb(1638 from dbSNP Build 137)    SNPs within 2kb including multiple locations(1642)
Protein-related
information
ResourceIDDescription
InterPro IPR013099 Ion transport 2
InterPro IPR016040 NAD(P)-binding domain
InterPro IPR003929 Potassium channel, calcium-activated, BK, alpha subunit
Protein Ontology PR:000002081 potassium channel subfamily T member 2
References
(Earliest) J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
(Latest) J:198109 Oeschger FM, et al., Gene expression analysis of the embryonic subplate. Cereb Cortex. 2012 Jun;22(6):1343-59
All references(27)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory