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Atxn7l3 Gene Detail
Summary
  • Symbol
    Atxn7l3
  • Name
    ataxin 7-like 3
  • Synonyms
    E030022H21Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:3036270
    NCBI Gene: 217218
Location & Maps
more
  • Sequence Map
    Chr11:102289300-102296631 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      7332 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 66.29 cM
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    ATXN7L3, ataxin 7 like 3
  • Vertebrate Orthologs
    8
  • Human Ortholog
    ATXN7L3, ataxin 7 like 3
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 56970
    neXtProt AC: NX_Q14CW9

  • Chr Location
    17q21.31; chr17:44191805-44199701 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    4 phenotypes from 1 allele in 1 genetic background
    10 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
  • All Mutations and Alleles
    3
  • Targeted
    3
  • Genomic Mutations
    1 involving Atxn7l3
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000002723 VEGA Gene Model | MGI Sequence Detail 7332 C57BL/6J ±  kb
transcript OTTMUST00000005402 VEGA | MGI Sequence Detail 3408 Not Applicable  
polypeptide OTTMUSP00000002568 VEGA | MGI Sequence Detail 350 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    11 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 4
References
more
  • Summaries
    All 21
    Gene Ontology 2
    Phenotypes 10
  • Earliest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
  • Latest
    J:213770 Bonnet J, et al., The SAGA coactivator complex acts on the whole transcribed genome and is required for RNA polymerase II transcription. Genes Dev. 2014 Sep 15;28(18):1999-2012

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support.
last database update
09/20/2016
MGI 6.05
The Jackson Laboratory