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Cd300c Gene Detail
Summary
  • Symbol
    Cd300c
  • Name
    CD300C molecule
  • Synonyms
    Clm6
  • Feature Type
    protein coding gene
  • IDs
    MGI:3032626
    NCBI Gene: 387565
  • Gene Overview
    MyGene.info: CD300C
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:114956105-114960507 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 80.56 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    161 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3032626
protein coding gene Chr11:114956105-114969157 (-)
129S1/SvImJ MGP_129S1SvImJ_G0019365
protein coding gene Chr11:118926758-118941146 (-)
A/J MGP_AJ_G0019334
protein coding gene Chr11:113747254-113752342 (-)
AKR/J MGP_AKRJ_G0019302
protein coding gene Chr11:117132169-117146033 (-)
BALB/cJ MGP_BALBcJ_G0019307
protein coding gene Chr11:114155586-114170925 (-)
C3H/HeJ MGP_C3HHeJ_G0019116
protein coding gene Chr11:117467840-117470806 (-)
C57BL/6NJ MGP_C57BL6NJ_G0019758
protein coding gene Chr11:122488678-122505482 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0017382
protein coding gene Chr11:110830413-110843190 (-)
CAST/EiJ MGP_CASTEiJ_G0018670
protein coding gene Chr11:118808873-118813214 (-)
CBA/J MGP_CBAJ_G0019086
protein coding gene Chr11:127404018-127411224 (-)
DBA/2J MGP_DBA2J_G0019198
protein coding gene Chr11:113183188-113196706 (-)
FVB/NJ MGP_FVBNJ_G0019189
protein coding gene Chr11:112664771-112679152 (-)
LP/J MGP_LPJ_G0019268
protein coding gene Chr11:119327293-119341059 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0019220
protein coding gene Chr11:126534697-126558019 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0019795
protein coding gene Chr11:117786191-117802996 (-)
PWK/PhJ MGP_PWKPhJ_G0018435
protein coding gene Chr11:114420736-114435650 (-)
SPRET/EiJ MGP_SPRETEiJ_G0018227
protein coding gene Chr11:117602942-117607179 (-)
WSB/EiJ MGP_WSBEiJ_G0018722
protein coding gene Chr11:117746407-117761580 (-)



Homology
more
  • Human Ortholog
    CD300C, CD300c molecule
  • Vertebrate Orthologs
    15
  • Human Ortholog
    CD300C, CD300c molecule
    Orthology source: HomoloGene, HGNC
  • Synonyms
    CLM-6, CMRF35, CMRF-35, CMRF35A, CMRF-35A, CMRF35A1, CMRF35-A1, IGSF16, LIR
  • Links
    NCBI Gene ID: 10871
    neXtProt AC: NX_Q08708
    UniProt: Q08708

  • Chr Location
    17q25.1; chr17:74534359-74546171 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotypes from 1 allele in 1 genetic background
    2 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
  • Comparison Matrix
  • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 387565 NCBI Gene Model | MGI Sequence Detail 4403 C57BL/6J ±  kb
    transcript NM_001368239 RefSeq | MGI Sequence Detail 953 C57BL/6  
    polypeptide A2A7V7 UniProt | EBI | MGI Sequence Detail 229 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 1
      cDNA 1

      Microarray probesets 1
    References
    more
    • Summaries
      All 16
      Gene Ontology 1
      Phenotypes 2
    • Earliest
      J:86931 Chung DH, et al., CMRF-35-like molecule-1, a novel mouse myeloid receptor, can inhibit osteoclast formation. J Immunol. 2003 Dec 15;171(12):6541-8
    • Latest
      J:262974 Kaitani A, et al., Leukocyte mono-immunoglobulin-like receptor 8 (LMIR8)/CLM-6 is an FcRgamma-coupled receptor selectively expressed in mouse tissue plasmacytoid dendritic cells. Sci Rep. 2018 May 29;8(1):8259

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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    Funding Information
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    last database update
    03/24/2020
    MGI 6.15
    The Jackson Laboratory