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Cd300c Gene Detail
Summary
  • Symbol
    Cd300c
  • Name
    CD300C molecule
  • Synonyms
    Clm6
  • Feature Type
    protein coding gene
  • IDs
    MGI:3032626
    NCBI Gene: 387565
  • Gene Overview
    MyGene.info: CD300C
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:114956105-114960507 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 80.56 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    161 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3032626
protein coding gene Chr11:114956105-114969157 (-)
129S1/SvImJ MGP_129S1SvImJ_G0019365
protein coding gene Chr11:118926758-118941146 (-)
A/J MGP_AJ_G0019334
protein coding gene Chr11:113747254-113752342 (-)
AKR/J MGP_AKRJ_G0019302
protein coding gene Chr11:117132169-117146033 (-)
BALB/cJ MGP_BALBcJ_G0019307
protein coding gene Chr11:114155586-114170925 (-)
C3H/HeJ MGP_C3HHeJ_G0019116
protein coding gene Chr11:117467840-117470806 (-)
C57BL/6NJ MGP_C57BL6NJ_G0019758
protein coding gene Chr11:122488678-122505482 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0017382
protein coding gene Chr11:110830413-110843190 (-)
CAST/EiJ MGP_CASTEiJ_G0018670
protein coding gene Chr11:118808873-118813214 (-)
CBA/J MGP_CBAJ_G0019086
protein coding gene Chr11:127404018-127411224 (-)
DBA/2J MGP_DBA2J_G0019198
protein coding gene Chr11:113183188-113196706 (-)
FVB/NJ MGP_FVBNJ_G0019189
protein coding gene Chr11:112664771-112679152 (-)
LP/J MGP_LPJ_G0019268
protein coding gene Chr11:119327293-119341059 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0019220
protein coding gene Chr11:126534697-126558019 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0019795
protein coding gene Chr11:117786191-117802996 (-)
PWK/PhJ MGP_PWKPhJ_G0018435
protein coding gene Chr11:114420736-114435650 (-)
SPRET/EiJ MGP_SPRETEiJ_G0018227
protein coding gene Chr11:117602942-117607179 (-)
WSB/EiJ MGP_WSBEiJ_G0018722
protein coding gene Chr11:117746407-117761580 (-)



Homology
more
  • Human Ortholog
    CD300C, CD300c molecule
  • Vertebrate Orthologs
    15
  • Human Ortholog
    CD300C, CD300c molecule
    Orthology source: HomoloGene, HGNC
  • Synonyms
    CLM-6, CMRF35, CMRF-35, CMRF35A, CMRF-35A, CMRF35A1, CMRF35-A1, IGSF16, LIR
  • Links
    NCBI Gene ID: 10871
    neXtProt AC: NX_Q08708
    UniProt: Q08708

  • Chr Location
    17q25.1; chr17:74534359-74546171 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
  • UniGene
Representative SequencesLengthStrain/SpeciesFlank
genomic 387565 NCBI Gene Model | MGI Sequence Detail 4403 C57BL/6J ±  kb
transcript NM_199225 RefSeq | MGI Sequence Detail 690 C57BL/6  
polypeptide A2A7V7 UniProt | EBI | MGI Sequence Detail 229 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    3 Sequences
  • InterPro Domains
    IPR007110 Immunoglobulin-like domain
    IPR036179 Immunoglobulin-like domain superfamily
    IPR013783 Immunoglobulin-like fold
    IPR003599 Immunoglobulin subtype
    IPR013106 Immunoglobulin V-set domain
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
References
more
  • Summaries
    All 12
    Gene Ontology 1
    Phenotypes 1
  • Earliest
    J:86931 Chung DH, et al., CMRF-35-like molecule-1, a novel mouse myeloid receptor, can inhibit osteoclast formation. J Immunol. 2003 Dec 15;171(12):6541-8

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory