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Olfr1393 Gene Detail
Summary
  • Symbol
    Olfr1393
  • Name
    olfactory receptor 1393
  • Synonyms
    GA_x6K02T2QP88-6154577-6153642, MOR256-24, MOR256-67_i
  • Feature Type
    protein coding gene
  • IDs
    MGI:3031227
    NCBI Gene: 258463
  • Gene Overview
    MyGene.info: OR2Y1
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr11:49278304-49282769 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 29.31 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    120 from dbSNP Build 142
  • Strain Annotations
    7
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3031227
protein coding gene Chr11:49269315-49282769 (+)
129S1/SvImJ no annotation
A/J MGP_AJ_G0018194
protein coding gene Chr11:46526046-46527971 (+)
AKR/J MGP_AKRJ_G0018161
protein coding gene Chr11:47951613-47952662 (+)
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0018614
protein coding gene Chr11:49833394-49854693 (+)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0017949
protein coding gene Chr11:52141171-52148342 (+)
DBA/2J no annotation
FVB/NJ no annotation
LP/J MGP_LPJ_G0018132
protein coding gene Chr11:48738131-48738720 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0018077
protein coding gene Chr11:53664481-53673781 (+)
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    OR2Y1, olfactory receptor family 2 subfamily Y member 1
  • Vertebrate Orthologs
    3
  • Human Ortholog
    OR2Y1, olfactory receptor family 2 subfamily Y member 1
    Orthology source: HGNC
  • Synonyms
    OR5-2
  • Links
    NCBI Gene ID: 134083
    neXtProt AC: NX_Q8NGV0
    UniProt: Q8NGV0

  • Chr Location
    5q35.3; chr5:180739123-180740058 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000059864 Ensembl Gene Model | MGI Sequence Detail 4466 C57BL/6J ±  kb
transcript ENSMUST00000213323 Ensembl | MGI Sequence Detail 3010 Not Applicable  
polypeptide ENSMUSP00000149358 Ensembl | MGI Sequence Detail 311 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR017452 GPCR, rhodopsin-like, 7TM
    IPR000276 G protein-coupled receptor, rhodopsin-like
    IPR000725 Olfactory receptor
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 1
References
more
  • Summaries
    All 17
    Gene Ontology 3
    Phenotypes 3
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/13/2019
MGI 6.13
The Jackson Laboratory