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Olfr1273-ps Pseudogene Detail
Summary
  • Symbol
    Olfr1273-ps
  • Name
    olfactory receptor 1273, pseudogene
  • Synonyms
    GA_x6K02T2Q125-51650793-51649870, MOR227-4
  • Feature Type
    polymorphic pseudogene
  • IDs
    MGI:3031107
    NCBI Gene: 258977
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr2:90295936-90296859 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 50.16 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    24 from dbSNP Build 142
  • Strain Annotations
    13
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3031107
polymorphic pseudogene Chr2:90292234-90298714 (-)
129S1/SvImJ MGP_129S1SvImJ_G0040268
pseudogene Chr2:91505716-91506640 (-)
A/J MGP_AJ_G0040247
pseudogene Chr2:87888086-87889010 (-)
AKR/J MGP_AKRJ_G0040182
pseudogene Chr2:90321082-90322006 (-)
BALB/cJ MGP_BALBcJ_G0040246
pseudogene Chr2:88054372-88055296 (-)
C3H/HeJ MGP_C3HHeJ_G0039884
pseudogene Chr2:90554312-90555236 (-)
C57BL/6NJ MGP_C57BL6NJ_G0040838
pseudogene Chr2:94713381-94714305 (-)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0039851
pseudogene Chr2:97965740-97966664 (-)
DBA/2J MGP_DBA2J_G0040047
pseudogene Chr2:87463635-87464559 (-)
FVB/NJ MGP_FVBNJ_G0040003
pseudogene Chr2:86585918-86586842 (-)
LP/J MGP_LPJ_G0040095
pseudogene Chr2:91687953-91688877 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0040001
pseudogene Chr2:101041386-101042310 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0040940
pseudogene Chr2:90364520-90365444 (-)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Targeted
    2
  • Genomic Mutations
    4 involving Olfr1273-ps
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 258977 NCBI Gene Model | MGI Sequence Detail 924 C57BL/6J ±  kb
transcript NM_146975 RefSeq | MGI Sequence Detail 924 Not Specified  
polypeptide NP_667186 RefSeq | MGI Sequence Detail 307 Not Specified  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3

    Microarray probesets 1
References
more
  • Summaries
    All 15
    Gene Ontology 1
    Phenotypes 5
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:239613 Zhang J, et al., Differentially expressed genes in the testicular tissues of adenylyl cyclase 3 knockout mice. Gene. 2017 Feb 20;602:33-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory