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Or4c52 Gene Detail
Summary
  • Symbol
    Or4c52
  • Name
    olfactory receptor family 4 subfamily C member 52
  • Synonyms
    GA_x6K02T2Q125-51447049-51447969, MOR234-2, Olfr1263
  • Feature Type
    protein coding gene
  • IDs
    MGI:3031097
    NCBI Gene: 258790
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr2:89845276-89846196 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 50.13 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    8 from dbSNP Build 142
  • Strain Annotations
    13
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3031097
 protein coding gene Chr2:89842475-89848768 (+)
129S1/SvImJ no annotation
A/J MGP_AJ_G0026079
 protein coding gene Chr2:87603730-87607104 (+)
AKR/J MGP_AKRJ_G0026060
 protein coding gene Chr2:90055139-90058513 (+)
BALB/cJ no annotation
C3H/HeJ MGP_C3HHeJ_G0025842
 protein coding gene Chr2:90252710-90253643 (+)
C57BL/6NJ MGP_C57BL6NJ_G0026538
 protein coding gene Chr2:94369051-94387924 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0023931
 protein coding gene Chr2:84308819-84322954 (+)
CAST/EiJ MGP_CASTEiJ_G0025306
 protein coding gene Chr2:90830981-90831968 (+)
CBA/J MGP_CBAJ_G0025818
 protein coding gene Chr2:97634338-97637712 (+)
DBA/2J MGP_DBA2J_G0025952
 protein coding gene Chr2:87138097-87157949 (+)
FVB/NJ no annotation
LP/J MGP_LPJ_G0026057
 protein coding gene Chr2:91377471-91380845 (+)
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0026595
 protein coding gene Chr2:90076885-90078745 (+)
PWK/PhJ MGP_PWKPhJ_G0025040
 protein coding gene Chr2:87068992-87069978 (+)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0025372
 protein coding gene Chr2:90804090-90806770 (+)



Homology
more
  • Human Ortholog
    OR4C45, olfactory receptor family 4 subfamily C member 45 (gene/pseudogene)
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    OR4C45, olfactory receptor family 4 subfamily C member 45 (gene/pseudogene)
  • Links
    NCBI Gene ID: 403257
    neXtProt AC: NX_A6NMZ5
    UniProt: A6NMZ5

  • Chr Location
    11p11.12; chr11:50032874-50033794 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    6
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    707
  • Tissues
    1
  • cDNA Data
    4
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 258790 NCBI Gene Model | MGI Sequence Detail 921 C57BL/6J ±  kb
transcript NM_146794 RefSeq | MGI Sequence Detail 921 Not Specified  
polypeptide NP_667005 RefSeq | MGI Sequence Detail 306 Not Specified  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR017452 GPCR, rhodopsin-like, 7TM
    IPR000276 G protein-coupled receptor, rhodopsin-like
    IPR000725 Olfactory receptor
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 1
References
more
  • Summaries
    All 20
    Developmental Gene Expression 1
    Gene Ontology 2
    Phenotypes 6
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:289678 Olender T, et al., A unified nomenclature for vertebrate olfactory receptors. BMC Evol Biol. 2020 Apr 15;20(1):42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory