Or8k42-ps1 Pseudogene Detail

Summary

• Symbol
  Or8k42-ps1
• Name
  olfactory receptor family 8 subfamily K member 42, pseudogene 1
• Synonyms
  GA_x6K02T2Q125-47968791-47967887, MOR188-6P, Olfr1073-ps1

• Feature Type
  pseudogene
• IDs
  MGI:3030907
  NCBI Gene: 257989
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:86318250-86319150 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 49.82 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  89 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3030907	pseudogene	Chr2:86318250-86319150 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0040244	pseudogene	Chr2:87410400-87411287 (-)
A/J	MGP_AJ_G0040225	pseudogene	Chr2:83893790-83894676 (-)
AKR/J	MGP_AKRJ_G0040159	pseudogene	Chr2:86159049-86159935 (-)
BALB/cJ	MGP_BALBcJ_G0040225	pseudogene	Chr2:84090457-84091343 (-)
C3H/HeJ	MGP_C3HHeJ_G0039863	pseudogene	Chr2:86378929-86379815 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0040815	pseudogene	Chr2:90228624-90229616 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0037253	pseudogene	Chr2:80825666-80826551 (-)
CAST/EiJ	MGP_CASTEiJ_G0038953	pseudogene	Chr2:86927126-86928013 (-)
CBA/J	MGP_CBAJ_G0039833	pseudogene	Chr2:93267528-93268414 (-)
DBA/2J	MGP_DBA2J_G0040025	pseudogene	Chr2:83476712-83477598 (-)
FVB/NJ	MGP_FVBNJ_G0039983	pseudogene	Chr2:82629042-82629930 (-)
LP/J	MGP_LPJ_G0040073	pseudogene	Chr2:87359570-87360456 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039980	pseudogene	Chr2:95800341-95801227 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040915	pseudogene	Chr2:86373928-86374814 (-)
PWK/PhJ	MGP_PWKPhJ_G0038643	pseudogene	Chr2:83390432-83391319 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0038339	pseudogene	Chr2:86363434-86364320 (-)
WSB/EiJ	MGP_WSBEiJ_G0039171	pseudogene	Chr2:87039911-87040799 (-)

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  1
• Targeted
  2
• Genomic Mutations
  3 involving Or8k42-ps1
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  26
• RefSeq
  1

• Ensembl
  ENSMUSG00000082547 (Evidence), ENSMUSG00000111518 (Evidence)
• NCBI Gene
  257989

Representative Sequences			Length	Strain/Species
genomic	257989	NCBI Gene Model | MGI Sequence Detail	901	C57BL/6J

References

• Summaries
  All 12

  Phenotypes 5
• Earliest
  J:74521 Zhang X, et al., The olfactory receptor gene superfamily of the mouse. Nat Neurosci. 2002 Feb;5(2):124-33
• Latest
  J:289678 Olender T, et al., A unified nomenclature for vertebrate olfactory receptors. BMC Evol Biol. 2020 Apr 15;20(1):42