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Olfr1040 Gene Detail
Summary
  • Symbol
    Olfr1040
  • Name
    olfactory receptor 1040
  • Synonyms
    GA_x6K02T2Q125-47615732-47614791, MOR185-12
  • Feature Type
    protein coding gene
  • IDs
    MGI:3030874
    NCBI Gene: 404323
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr2:86145791-86146732 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 49.73 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    44 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3030874
protein coding gene Chr2:86145791-86146732 (-)
129S1/SvImJ MGP_129S1SvImJ_G0025955
protein coding gene Chr2:86975945-86976886 (-)
A/J MGP_AJ_G0025925
protein coding gene Chr2:83526109-83527050 (-)
AKR/J no annotation
BALB/cJ MGP_BALBcJ_G0025927
protein coding gene Chr2:83723162-83724462 (-)
C3H/HeJ MGP_C3HHeJ_G0025683
protein coding gene Chr2:85986725-85987666 (-)
C57BL/6NJ MGP_C57BL6NJ_G0026376
protein coding gene Chr2:89754358-89755294 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0023778
protein coding gene Chr2:80264919-80265860 (-)
CAST/EiJ MGP_CASTEiJ_G0025146
protein coding gene Chr2:86585998-86586870 (-)
CBA/J MGP_CBAJ_G0025664
protein coding gene Chr2:92811066-92812007 (-)
DBA/2J MGP_DBA2J_G0025795
protein coding gene Chr2:83060795-83061736 (-)
FVB/NJ MGP_FVBNJ_G0025757
protein coding gene Chr2:82268968-82269909 (-)
LP/J MGP_LPJ_G0025892
protein coding gene Chr2:86919182-86920123 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0025787
protein coding gene Chr2:95240622-95241563 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0026429
protein coding gene Chr2:85982593-85983534 (-)
PWK/PhJ MGP_PWKPhJ_G0024887
protein coding gene Chr2:82978156-82979028 (-)
SPRET/EiJ MGP_SPRETEiJ_G0024694
protein coding gene Chr2:86056320-86057192 (-)
WSB/EiJ MGP_WSBEiJ_G0025215
protein coding gene Chr2:86632936-86633877 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 404323 NCBI Gene Model | MGI Sequence Detail 942 C57BL/6J ±  kb
transcript NM_207561 RefSeq | MGI Sequence Detail 942 Not Specified  
polypeptide NP_997444 RefSeq | MGI Sequence Detail 313 Not Specified  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR017452 GPCR, rhodopsin-like, 7TM
    IPR000276 G protein-coupled receptor, rhodopsin-like
    IPR000725 Olfactory receptor
Molecular
Reagents
less

  • Microarray probesets 1
References
more
  • Summaries
    All 15
    Gene Ontology 2
    Phenotypes 5
  • Earliest
    J:88213 Young JM, et al., Odorant receptor expressed sequence tags demonstrate olfactory expression of over 400 genes, extensive alternate splicing and unequal expression levels. Genome Biol. 2003;4(11):R71
  • Latest
    J:269738 Guerreiro I, et al., Reorganisation of Hoxd regulatory landscapes during the evolution of a snake-like body plan. Elife. 2016 Aug 1;5

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
12/03/2019
MGI 6.14
The Jackson Laboratory