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Or5m11d-ps1 Pseudogene Detail
Summary
  • Symbol
    Or5m11d-ps1
  • Name
    olfactory receptor family 5 subfamily M member 11D, pseudogene 1
  • Synonyms
    GA_x6K02T2Q125-47411492-47412238, MOR198-2P, MOR198-5_p, Olfr1027-ps1
  • Feature Type
    pseudogene
  • IDs
    MGI:3030861
    NCBI Gene: 258082
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr2:85762489-85763782 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 49.68 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    30 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3030861
pseudogene Chr2:85762458-85763889 (+)
129S1/SvImJ MGP_129S1SvImJ_G0040237
pseudogene Chr2:86717698-86719039 (+)
A/J MGP_AJ_G0040220
pseudogene Chr2:83323438-83324779 (+)
AKR/J MGP_AKRJ_G0040154
pseudogene Chr2:85501567-85502908 (+)
BALB/cJ MGP_BALBcJ_G0040221
pseudogene Chr2:83476062-83477403 (+)
C3H/HeJ MGP_C3HHeJ_G0039860
pseudogene Chr2:85731527-85732868 (+)
C57BL/6NJ MGP_C57BL6NJ_G0040809
pseudogene Chr2:89454531-89455872 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0038946
pseudogene Chr2:86340425-86341766 (+)
CBA/J MGP_CBAJ_G0039828
pseudogene Chr2:92572981-92574322 (+)
DBA/2J MGP_DBA2J_G0040021
pseudogene Chr2:82855503-82856844 (+)
FVB/NJ MGP_FVBNJ_G0039978
pseudogene Chr2:82084243-82085584 (+)
LP/J MGP_LPJ_G0040067
pseudogene Chr2:86712063-86713404 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0039974
pseudogene Chr2:94980977-94982318 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0040909
pseudogene Chr2:85755575-85756916 (+)
PWK/PhJ MGP_PWKPhJ_G0038637
pseudogene Chr2:82743568-82744909 (+)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0039164
pseudogene Chr2:86426038-86427379 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    1
  • Gene trapped
    1
  • Targeted
    2
  • Genomic Mutations
    3 involving Or5m11d-ps1
  • Find Mice (IMSR)
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000082892 Ensembl Gene Model | MGI Sequence Detail 1294 C57BL/6J ±  kb
transcript ENSMUST00000122338 Ensembl | MGI Sequence Detail 875 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 14
    Phenotypes 6
  • Earliest
    J:74521 Zhang X, et al., The olfactory receptor gene superfamily of the mouse. Nat Neurosci. 2002 Feb;5(2):124-33
  • Latest
    J:289678 Olender T, et al., A unified nomenclature for vertebrate olfactory receptors. BMC Evol Biol. 2020 Apr 15;20(1):42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
11/26/2022
MGI 6.22
The Jackson Laboratory