About   Help   FAQ
Or13c9 Gene Detail
Summary
  • Symbol
    Or13c9
  • Name
    olfactory receptor family 13 subfamily C member 9
  • Synonyms
    GA_x6K02T2N78B-7060274-7061225, MOR262-3, Olfr271
Location &
Maps
more
  • Sequence Map
    Chr4:52935430-52936381 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 28.57 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3030105
protein coding gene Chr4:52935430-52936381 (-)
129S1/SvImJ MGP_129S1SvImJ_G0040351
pseudogene Chr4:51540767-51541718 (-)
A/J MGP_AJ_G0040325
pseudogene Chr4:49571516-49572466 (-)
AKR/J MGP_AKRJ_G0040258
pseudogene Chr4:50926983-50927934 (-)
BALB/cJ MGP_BALBcJ_G0040325
pseudogene Chr4:49749077-49750027 (-)
C3H/HeJ MGP_C3HHeJ_G0039951
pseudogene Chr4:51477977-51478927 (-)
C57BL/6NJ MGP_C57BL6NJ_G0040929
pseudogene Chr4:53458390-53459341 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0037333
pseudogene Chr4:46542219-46543169 (-)
CAST/EiJ MGP_CASTEiJ_G0039029
pseudogene Chr4:51112931-51113882 (-)
CBA/J MGP_CBAJ_G0039917
pseudogene Chr4:55275628-55276579 (-)
DBA/2J MGP_DBA2J_G0040122
pseudogene Chr4:49545363-49546314 (-)
FVB/NJ MGP_FVBNJ_G0040079
pseudogene Chr4:48775875-48776826 (-)
LP/J MGP_LPJ_G0040171
pseudogene Chr4:51651567-51652518 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0040074
pseudogene Chr4:58512053-58513004 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0041020
pseudogene Chr4:51159572-51160523 (-)
PWK/PhJ MGP_PWKPhJ_G0038721
pseudogene Chr4:49501094-49502044 (-)
SPRET/EiJ MGP_SPRETEiJ_G0038424
pseudogene Chr4:50451467-50452417 (-)
WSB/EiJ MGP_WSBEiJ_G0039268
pseudogene Chr4:51052055-51053006 (-)



Homology
more
  • Human Ortholog
    OR13C2, olfactory receptor family 13 subfamily C member 2
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    OR13C2, olfactory receptor family 13 subfamily C member 2
  • Synonyms
    OR37K
  • Links
    NCBI Gene ID: 392376
    neXtProt AC: NX_Q8NGS9
    UniProt: Q8NGS9

  • Chr Location
    9q31.1; chr9:104604671-104605627 (-)  GRCh38.p7

  • Human Ortholog
    OR13C5, olfactory receptor family 13 subfamily C member 5
  • Synonyms
    OR9-11
  • Links
    NCBI Gene ID: 138799
    neXtProt AC: NX_Q8NGS8
    UniProt: Q8NGS8

  • Chr Location
    9q31.1; chr9:104598457-104599413 (-)  GRCh38.p7

  • Human Ortholog
    OR13C9, olfactory receptor family 13 subfamily C member 9
  • Synonyms
    OR37L, OR9-13
  • Links
    NCBI Gene ID: 286362
    neXtProt AC: NX_Q8NGT0
    UniProt: Q8NGT0

  • Chr Location
    9q31.1; chr9:104617248-104618204 (-)  GRCh38.p7

Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic 258856 NCBI Gene Model | MGI Sequence Detail 952 C57BL/6J ±  kb
polypeptide A0A1L1SQH2 UniProt | EBI | MGI Sequence Detail 283 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR017452 GPCR, rhodopsin-like, 7TM
    IPR000276 G protein-coupled receptor, rhodopsin-like
    IPR000725 Olfactory receptor
References
more
  • Summaries
    All 9
    Gene Ontology 1
  • Earliest
    J:74521 Zhang X, et al., The olfactory receptor gene superfamily of the mouse. Nat Neurosci. 2002 Feb;5(2):124-33
  • Latest
    J:289678 Olender T, et al., A unified nomenclature for vertebrate olfactory receptors. BMC Evol Biol. 2020 Apr 15;20(1):42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
08/09/2022
MGI 6.21
The Jackson Laboratory