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Olfr239 Gene Detail
Summary
  • Symbol
    Olfr239
  • Name
    olfactory receptor 239
  • Synonyms
    GA_x6K02T2KN0P-2543-1596, MOR267-10
  • Feature Type
    protein coding gene
  • IDs
    MGI:3030073
    NCBI Gene: 100038860
  • Gene Overview
    MyGene.info: OR10H1
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr17:33199062-33200009 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 17, 17.98 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    25 from dbSNP Build 142
  • Strain Annotations
    9
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3030073
protein coding gene Chr17:33191302-33202506 (.)
129S1/SvImJ no annotation
A/J no annotation
AKR/J MGP_AKRJ_G0023448
protein coding gene Chr17:32328550-32329567 (-)
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0023929
protein coding gene Chr17:34305028-34312371 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0022750
protein coding gene Chr17:32791176-32792223 (+)
CBA/J MGP_CBAJ_G0023223
protein coding gene Chr17:35733224-35734160 (-)
DBA/2J MGP_DBA2J_G0023353
protein coding gene Chr17:31391855-31392681 (-)
FVB/NJ no annotation
LP/J MGP_LPJ_G0023432
protein coding gene Chr17:33372908-33373944 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0023343
protein coding gene Chr17:34727004-34728141 (+)
NZO/HlLtJ no annotation
PWK/PhJ MGP_PWKPhJ_G0022498
protein coding gene Chr17:30278041-30278923 (+)
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    OR10H1, olfactory receptor family 10 subfamily H member 1
  • Vertebrate Orthologs
    13
  • Human Ortholog
    OR10H1, olfactory receptor family 10 subfamily H member 1
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 26539
    neXtProt AC: NX_Q9Y4A9
    UniProt: Q9Y4A9

  • Chr Location
    19p13.12; chr19:15806957-15808759 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 100038860 NCBI Gene Model | MGI Sequence Detail 948 C57BL/6J ±  kb
transcript NM_207175 RefSeq | MGI Sequence Detail 948 C57BL/6  
polypeptide NP_997058 RefSeq | MGI Sequence Detail 315 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR017452 GPCR, rhodopsin-like, 7TM
    IPR000276 G protein-coupled receptor, rhodopsin-like
    IPR000725 Olfactory receptor
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
Other
Accession IDs
less
MGI:3779321
References
more
  • Summaries
    All 14
    Gene Ontology 3
  • Earliest
    J:74521 Zhang X, et al., The olfactory receptor gene superfamily of the mouse. Nat Neurosci. 2002 Feb;5(2):124-33
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory