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Olfr172 Gene Detail
Summary
  • Symbol
    Olfr172
  • Name
    olfactory receptor 172
  • Synonyms
    GA_x54KRFPKG5P-54930346-54929417, MOR184-2
  • Feature Type
    protein coding gene
  • IDs
    MGI:3030006
    NCBI Gene: 259003
  • Gene Overview
    MyGene.info: OR5K1
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr16:58760152-58761240 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 16, 34.83 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    56 from dbSNP Build 142
  • Strain Annotations
    13
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3030006
protein coding gene Chr16:58759544-58763176 (-)
129S1/SvImJ MGP_129S1SvImJ_G0022909
protein coding gene Chr16:57982405-57983491 (-)
A/J MGP_AJ_G0022875
protein coding gene Chr16:55478498-55480997 (-)
AKR/J MGP_AKRJ_G0022847
protein coding gene Chr16:57199773-57200861 (-)
BALB/cJ MGP_BALBcJ_G0022875
protein coding gene Chr16:55562029-55563270 (-)
C3H/HeJ MGP_C3HHeJ_G0022638
protein coding gene Chr16:57427530-57429752 (-)
C57BL/6NJ MGP_C57BL6NJ_G0023323
protein coding gene Chr16:59558170-59559963 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0022165
protein coding gene Chr16:57765226-57767532 (-)
CBA/J no annotation
DBA/2J no annotation
FVB/NJ no annotation
LP/J no annotation
NOD/ShiLtJ MGP_NODShiLtJ_G0022736
protein coding gene Chr16:62315733-62316821 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0023338
protein coding gene Chr16:57339700-57340788 (-)
PWK/PhJ MGP_PWKPhJ_G0021904
protein coding gene Chr16:55505835-55541469 (-)
SPRET/EiJ MGP_SPRETEiJ_G0021735
protein coding gene Chr16:57121806-57126744 (-)
WSB/EiJ MGP_WSBEiJ_G0022210
protein coding gene Chr16:57419785-57420876 (-)



Homology
more
  • Human Ortholog
    OR5K1, olfactory receptor family 5 subfamily K member 1
  • Vertebrate Orthologs
    7
  • Human Ortholog
    OR5K1, olfactory receptor family 5 subfamily K member 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    HSHTPCRX10, HTPCRX10, OR3-8
  • Links
    NCBI Gene ID: 26339
    neXtProt AC: NX_Q8NHB7
    UniProt: Q8NHB7

  • Chr Location
    3q11.2; chr3:98469480-98470576 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 259003 NCBI Gene Model | MGI Sequence Detail 1089 C57BL/6J ±  kb
transcript NM_147001 RefSeq | MGI Sequence Detail 1089 C57BL/6  
polypeptide NP_667212 RefSeq | MGI Sequence Detail 309 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR017452 GPCR, rhodopsin-like, 7TM
    IPR000276 G protein-coupled receptor, rhodopsin-like
    IPR000725 Olfactory receptor
Molecular
Reagents
less
  • All nucleic 2
    cDNA 2

    Microarray probesets 1
References
more
  • Summaries
    All 13
    Gene Ontology 3
  • Earliest
    J:74521 Zhang X, et al., The olfactory receptor gene superfamily of the mouse. Nat Neurosci. 2002 Feb;5(2):124-33
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory