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Nr1h5 Gene Detail
Summary
  • Symbol
    Nr1h5
  • Name
    nuclear receptor subfamily 1, group H, member 5
  • Synonyms
    FXRB
  • Feature Type
    protein coding gene
  • IDs
    MGI:3026618
    NCBI Gene: 381463
  • Alliance
Location & Maps
more
  • Sequence Map
    Chr3:102939658-102964133 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      24476 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 45.25 cM
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    NR1H5P, nuclear receptor subfamily 1 group H member 5, pseudogene
  • Vertebrate Orthologs
    5
  • Human Ortholog
    NR1H5P, nuclear receptor subfamily 1 group H member 5, pseudogene
    Orthology source: HGNC
  • Synonyms
    Fxrb, NR1H5
  • Links
    NCBI Gene ID: 643609

  • Chr Location
    1p13.2; chr1:114834456-114851544 (+)  GRCh38.p7

Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000054722 VEGA Gene Model | MGI Sequence Detail 24476 C57BL/6J ±  kb
transcript OTTMUST00000135622 VEGA | MGI Sequence Detail 2835 Not Applicable  
polypeptide OTTMUSP00000071737 VEGA | MGI Sequence Detail 505 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    150 from dbSNP Build 142
Protein
Information
less
  • UniProt
    11 Sequences
  • InterPro Domains
    IPR023257 Liver X receptor
    IPR001723 Nuclear hormone receptor
    IPR000536 Nuclear hormone receptor, ligand-binding domain
    IPR035500 Nuclear hormone receptor-like domain superfamily
    IPR013088 Zinc finger, NHR/GATA-type
    IPR001628 Zinc finger, nuclear hormone receptor-type
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6

    Microarray probesets 1
References
more
  • Summaries
    All 20
    Developmental Gene Expression 1
    Diseases 1
    Phenotypes 4
  • Earliest
    J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
  • Latest
    J:215487 Thompson CL, et al., A high-resolution spatiotemporal atlas of gene expression of the developing mouse brain. Neuron. 2014 Jul 16;83(2):309-23

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/31/2018
MGI 6.12
The Jackson Laboratory