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Gm1673 Gene Detail
Summary
  • Symbol
    Gm1673
  • Name
    predicted gene 1673
  • Synonyms
    LOC381633
  • Feature Type
    protein coding gene
  • IDs
    MGI:2686519
    NCBI Gene: 381633
  • Alliance
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:33983433-33985009 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 17.83 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    15 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2686519
protein coding gene Chr5:33983433-33985013 (+)
129S1/SvImJ MGP_129S1SvImJ_G0029456
protein coding gene Chr5:32185837-32187417 (+)
A/J MGP_AJ_G0029423
protein coding gene Chr5:31133510-31135100 (+)
AKR/J MGP_AKRJ_G0029372
protein coding gene Chr5:32334499-32336089 (+)
BALB/cJ MGP_BALBcJ_G0029433
protein coding gene Chr5:31659996-31661586 (+)
C3H/HeJ MGP_C3HHeJ_G0029155
protein coding gene Chr5:32367882-32369472 (+)
C57BL/6NJ MGP_C57BL6NJ_G0029887
protein coding gene Chr5:34072464-34074044 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0027124
protein coding gene Chr5:28930381-28931955 (+)
CAST/EiJ MGP_CASTEiJ_G0028564
protein coding gene Chr5:31449919-31451509 (+)
CBA/J MGP_CBAJ_G0029123
protein coding gene Chr5:34799689-34801279 (+)
DBA/2J MGP_DBA2J_G0029271
protein coding gene Chr5:31316378-31317968 (+)
FVB/NJ MGP_FVBNJ_G0029230
protein coding gene Chr5:30743987-30745567 (+)
LP/J MGP_LPJ_G0029356
protein coding gene Chr5:32607401-32608981 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0029260
protein coding gene Chr5:35675052-35676632 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0029920
protein coding gene Chr5:31851373-31852953 (+)
PWK/PhJ MGP_PWKPhJ_G0028289
protein coding gene Chr5:30447942-30449522 (+)
SPRET/EiJ MGP_SPRETEiJ_G0028120
protein coding gene Chr5:31306958-31308551 (+)
WSB/EiJ MGP_WSBEiJ_G0028645
protein coding gene Chr5:31925394-31926984 (+)



Homology
more
  • Human Ortholog
    C4orf48, chromosome 4 open reading frame 48
  • Vertebrate Orthologs
    4
  • Human Ortholog
    C4orf48, chromosome 4 open reading frame 48
    Orthology source: HGNC
  • Synonyms
    CHR4_55
  • Links
    NCBI Gene ID: 401115
    UniProt: Q5BLP8

  • Chr Location
    4p16.3; chr4:2035610-2043970 (+)  GRCh38.p7

Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    27 phenotype references
  • All Mutations and Alleles
    16
  • Chemically induced (ENU)
    1
  • Chemically induced (other)
    2
  • Gene trapped
    5
  • Radiation induced
    5
  • Spontaneous
    1
  • Targeted
    2
  • Genomic Mutations
    9 involving Gm1673
  • Incidental Mutations
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 381633 NCBI Gene Model | MGI Sequence Detail 1577 C57BL/6J ±  kb
transcript NM_001310547 RefSeq | MGI Sequence Detail 573 Not Specified  
polypeptide Q3UR78 UniProt | EBI | MGI Sequence Detail 90 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 1
References
more
  • Summaries
    All 41
    Diseases 1
    Gene Ontology 1
    Phenotypes 27
  • Earliest
    J:5021 Batchelor AL, et al., A comparison of the mutagenic effectiveness of chronic neutron- and gamma-irradiation of mouse spermatogonia. Mutat Res. 1966 Jun;3(3):218-29
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
02/18/2020
MGI 6.14
The Jackson Laboratory