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Armh1 Gene Detail
Summary
  • Symbol
    Armh1
  • Name
    armadillo-like helical domain containing 1
  • Synonyms
    Gm1661, LOC381543, LOC381544, Ncrna00082
  • Feature Type
    protein coding gene
  • IDs
    MGI:2686507
    NCBI Gene: 381544
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:117213326-117251973 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 53.43 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    162 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2686507
protein coding gene Chr4:117213326-117252125 (-)
129S1/SvImJ MGP_129S1SvImJ_G0028648
protein coding gene Chr4:118176318-118222684 (-)
A/J MGP_AJ_G0028609
protein coding gene Chr4:113620577-113658050 (-)
AKR/J MGP_AKRJ_G0028559
protein coding gene Chr4:116102286-116143289 (-)
BALB/cJ MGP_BALBcJ_G0028630
protein coding gene Chr4:114249148-114288712 (-)
C3H/HeJ MGP_C3HHeJ_G0028344
protein coding gene Chr4:117687579-117730954 (-)
C57BL/6NJ MGP_C57BL6NJ_G0029071
protein coding gene Chr4:122742471-122784009 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0026355
protein coding gene Chr4:107659681-107701239 (-)
CAST/EiJ MGP_CASTEiJ_G0027778
protein coding gene Chr4:114892160-114932610 (-)
CBA/J MGP_CBAJ_G0028311
protein coding gene Chr4:126094393-126145552 (-)
DBA/2J MGP_DBA2J_G0028459
protein coding gene Chr4:114253076-114292571 (-)
FVB/NJ MGP_FVBNJ_G0028427
protein coding gene Chr4:112759310-112799295 (-)
LP/J MGP_LPJ_G0028561
protein coding gene Chr4:118360631-118400748 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0028454
protein coding gene Chr4:131043513-131087971 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0029108
protein coding gene Chr4:117254372-117296887 (-)
PWK/PhJ MGP_PWKPhJ_G0027504
protein coding gene Chr4:111054910-111099634 (-)
SPRET/EiJ MGP_SPRETEiJ_G0027327
protein coding gene Chr4:113556831-113614822 (-)
WSB/EiJ MGP_WSBEiJ_G0027857
protein coding gene Chr4:117130815-117175945 (-)



Homology
more
  • Human Ortholog
    ARMH1, armadillo like helical domain containing 1
  • Vertebrate Orthologs
    10
  • Human Ortholog
    ARMH1, armadillo like helical domain containing 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C1orf228, NCRNA00082, p40
  • Links
    NCBI Gene ID: 339541
    neXtProt AC: NX_Q6PIY5
    UniProt: Q6PIY5

  • Chr Location
    1p34.1; chr1:44674696-44725591 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 28727
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: ARMH1
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 381544 NCBI Gene Model | MGI Sequence Detail 38648 C57BL/6J ±  kb
transcript NM_001145637 RefSeq | MGI Sequence Detail 1837 C57BL/6  
polypeptide NP_001139109 RefSeq | MGI Sequence Detail 441 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR011989 Armadillo-like helical
    IPR016024 Armadillo-type fold
    IPR041090 Protein of unknown function DUF5578
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6

    Microarray probesets 1
Other
Accession IDs
less
MGI:2686508
References
more
  • Summaries
    All 23
    Phenotypes 9
  • Earliest
    J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/10/2019
MGI 6.14
The Jackson Laboratory