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Armh1 Gene Detail
Summary
  • Symbol
    Armh1
  • Name
    armadillo-like helical domain containing 1
  • Synonyms
    Gm1661, LOC381543, LOC381544, Ncrna00082
  • Feature Type
    protein coding gene
  • IDs
    MGI:2686507
    NCBI Gene: 381544
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:117213326-117251917 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 53.43 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    162 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2686507
 protein coding gene Chr4:117213326-117252125 (-)
129S1/SvImJ MGP_129S1SvImJ_G0028648
 protein coding gene Chr4:118176318-118222684 (-)
A/J MGP_AJ_G0028609
 protein coding gene Chr4:113620577-113658050 (-)
AKR/J MGP_AKRJ_G0028559
 protein coding gene Chr4:116102286-116143289 (-)
BALB/cJ MGP_BALBcJ_G0028630
 protein coding gene Chr4:114249148-114288712 (-)
C3H/HeJ MGP_C3HHeJ_G0028344
 protein coding gene Chr4:117687579-117730954 (-)
C57BL/6NJ MGP_C57BL6NJ_G0029071
 protein coding gene Chr4:122742471-122784009 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0026355
 protein coding gene Chr4:107659681-107701239 (-)
CAST/EiJ MGP_CASTEiJ_G0027778
 protein coding gene Chr4:114892160-114932610 (-)
CBA/J MGP_CBAJ_G0028311
 protein coding gene Chr4:126094393-126145552 (-)
DBA/2J MGP_DBA2J_G0028459
 protein coding gene Chr4:114253076-114292571 (-)
FVB/NJ MGP_FVBNJ_G0028427
 protein coding gene Chr4:112759310-112799295 (-)
LP/J MGP_LPJ_G0028561
 protein coding gene Chr4:118360631-118400748 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0028454
 protein coding gene Chr4:131043513-131087971 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0029108
 protein coding gene Chr4:117254372-117296887 (-)
PWK/PhJ MGP_PWKPhJ_G0027504
 protein coding gene Chr4:111054910-111099634 (-)
SPRET/EiJ MGP_SPRETEiJ_G0027327
 protein coding gene Chr4:113556831-113614822 (-)
WSB/EiJ MGP_WSBEiJ_G0027857
 protein coding gene Chr4:117130815-117175945 (-)



Homology
more
  • Human Ortholog
    ARMH1, armadillo like helical domain containing 1
  • Vertebrate Orthologs
    10
  • Human Ortholog
    ARMH1, armadillo like helical domain containing 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C1orf228, NCRNA00082, p40
  • Links
    NCBI Gene ID: 339541
    neXtProt AC: NX_Q6PIY5
    UniProt: Q6PIY5

  • Chr Location
    1p34.1; chr1:44674696-44725591 (+)  GRCh38.p7
  • HomoloGene
    Vertebrate Homology Class 28727
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: ARMH1
  • Gene Tree
    Armh1
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    633
  • Tissues
    2
  • cDNA Data
    6
  • Literature Summary
    1
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 381544 NCBI Gene Model | MGI Sequence Detail 38592 C57BL/6J ±  kb
transcript NM_001145637 RefSeq | MGI Sequence Detail 1837 C57BL/6  
polypeptide NP_001139109 RefSeq | MGI Sequence Detail 441 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR011989 Armadillo-like helical
    IPR016024 Armadillo-type fold
    IPR041090 Protein of unknown function DUF5578
Molecular
Reagents
less
  • All nucleic 7
    cDNA 6
    Primer pair 1

    Microarray probesets 1
Other
Accession IDs
less
MGI:2686508
References
more
  • Summaries
    All 24
    Developmental Gene Expression 1
    Phenotypes 9
  • Earliest
    J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
  • Latest
    J:281427 Conway SJ, et al., Armadillo-like helical domain containing-4 is dynamically expressed in both the first and second heart fields. Gene Expr Patterns. 2019 Oct 24;34:119077
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
01/12/2021
MGI 6.16 		The Jackson Laboratory