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Xkr9 Gene Detail
Summary
  • Symbol
    Xkr9
  • Name
    X-linked Kx blood group related 9
  • Synonyms
    LOC381246
  • Feature Type
    protein coding gene
  • IDs
    MGI:2686466
    NCBI Gene: 381246
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:13668771-13701723 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 4.31 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    232 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2686466
protein coding gene Chr1:13668738-13702230 (.)
129S1/SvImJ MGP_129S1SvImJ_G0015844
protein coding gene Chr1:11045828-11090541 (+)
A/J MGP_AJ_G0015826
protein coding gene Chr1:10996299-11036611 (+)
AKR/J MGP_AKRJ_G0015785
protein coding gene Chr1:10934592-10977140 (+)
BALB/cJ MGP_BALBcJ_G0015782
protein coding gene Chr1:10697053-10735750 (+)
C3H/HeJ MGP_C3HHeJ_G0015616
protein coding gene Chr1:10911122-10949636 (+)
C57BL/6NJ MGP_C57BL6NJ_G0016236
protein coding gene Chr1:11570293-11616955 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0013957
protein coding gene Chr1:9610057-9648479 (+)
CAST/EiJ MGP_CASTEiJ_G0015196
protein coding gene Chr1:11097010-11139913 (+)
CBA/J MGP_CBAJ_G0015589
protein coding gene Chr1:11821373-11861126 (+)
DBA/2J MGP_DBA2J_G0015688
protein coding gene Chr1:10606792-10645773 (+)
FVB/NJ MGP_FVBNJ_G0015693
protein coding gene Chr1:10421907-10460177 (+)
LP/J MGP_LPJ_G0015760
protein coding gene Chr1:11234634-11276019 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0015712
protein coding gene Chr1:12530718-12578302 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0016283
protein coding gene Chr1:10840694-10883112 (+)
PWK/PhJ MGP_PWKPhJ_G0014980
protein coding gene Chr1:10419958-10462413 (+)
SPRET/EiJ MGP_SPRETEiJ_G0014761
protein coding gene Chr1:11062461-11103244 (+)
WSB/EiJ MGP_WSBEiJ_G0015260
protein coding gene Chr1:10855241-10901205 (+)



Homology
more
  • Human Ortholog
    XKR9, XK related 9
  • Vertebrate Orthologs
    10
  • Human Ortholog
    XKR9, XK related 9
    Orthology source: HomoloGene, HGNC
  • Synonyms
    XRG9
  • Links
    NCBI Gene ID: 389668
    neXtProt AC: NX_Q5GH70
    UniProt: Q5GH70

  • Chr Location
    8q13.3; chr8:70669365-71066635 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 20056
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: XKR9
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000067813 Ensembl Gene Model | MGI Sequence Detail 32953 C57BL/6J ±  kb
transcript ENSMUST00000088542 Ensembl | MGI Sequence Detail 1926 Not Applicable  
polypeptide ENSMUSP00000085900 Ensembl | MGI Sequence Detail 373 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 8
    cDNA 8

    Microarray probesets 1
References
more
  • Summaries
    All 19
    Developmental Gene Expression 1
    Gene Ontology 2
    Phenotypes 2
  • Earliest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory