E030044B06Rik Gene Detail

Summary

• Symbol
  E030044B06Rik
• Name
  RIKEN cDNA E030044B06 gene
• Synonyms
  E030007J07Rik, LOC381223

• Feature Type
  lncRNA gene
• IDs
  MGI:2686464
  NCBI Gene: 381223
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr19:40856760-40871083 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, 34.26 cM
• Mapping Data
  3 experiments

Strain
Comparison

• SNPs within 2kb
  84 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_2686464	lncRNA gene	Chr19:40856748-40871083 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0005832	lincRNA gene	Chr19:40111887-40118596 (+)
A/J	MGP_AJ_G0005824	lincRNA gene	Chr19:38169638-38178252 (+)
AKR/J	MGP_AKRJ_G0005799	lincRNA gene	Chr19:39450210-39456918 (+)
BALB/cJ	MGP_BALBcJ_G0005803	lincRNA gene	Chr19:38237810-38243815 (+)
C3H/HeJ	MGP_C3HHeJ_G0005750	lincRNA gene	Chr19:39589384-39596660 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0005963	lincRNA gene	Chr19:41191672-41198319 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005303	lincRNA gene	Chr19:37554610-37560121 (+)
CAST/EiJ	MGP_CASTEiJ_G0005688	lincRNA gene	Chr19:39222476-39228128 (+)
CBA/J	MGP_CBAJ_G0005735	lincRNA gene	Chr19:43196038-43204006 (+)
DBA/2J	MGP_DBA2J_G0005756	lincRNA gene	Chr19:38050577-38056266 (+)
FVB/NJ	MGP_FVBNJ_G0005782	lincRNA gene	Chr19:37803775-37809380 (+)
LP/J	MGP_LPJ_G0005836	lincRNA gene	Chr19:40134718-40140298 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0005769	lincRNA gene	Chr19:42870180-42875844 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0005960	lincRNA gene	Chr19:39474364-39480628 (+)
PWK/PhJ	MGP_PWKPhJ_G0005636	lincRNA gene	Chr19:37899560-37905486 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0005549	lincRNA gene	Chr19:38215997-38221580 (+)
WSB/EiJ	MGP_WSBEiJ_G0005741	lincRNA gene	Chr19:39640164-39645591 (+)

Homology

• Gene Tree
  E030044B06Rik
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  4

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  28
• RefSeq
  2

• Ensembl
  ENSMUSG00000097740 (Evidence)
• NCBI Gene
  381223

Representative Sequences			Length	Strain/Species
genomic	381223	NCBI Gene Model | MGI Sequence Detail	14324	C57BL/6J
transcript	NR_045343	RefSeq | MGI Sequence Detail	880	C57BL/6

Molecular
Reagents

• All nucleic 4

  cDNA 4

Other
Accession IDs

MGI:3028085

References

• Summaries
  All 11
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:57747 MGI Genome Annotation Group and UniGene Staff, MGI-UniGene Interconnection Effort. Database Download. 2015;