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Prob1 Gene Detail
Summary
  • Symbol
    Prob1
  • Name
    proline rich basic protein 1
  • Synonyms
    Gm1614, LOC381148
  • Feature Type
    protein coding gene
  • IDs
    MGI:2686460
    NCBI Gene: 381148
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr18:35650351-35655199 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 18, 19.20 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    21 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2686460
protein coding gene Chr18:35650351-35655238 (-)
129S1/SvImJ MGP_129S1SvImJ_G0024265
protein coding gene Chr18:33970721-33975608 (-)
A/J MGP_AJ_G0024231
protein coding gene Chr18:32803656-32808543 (-)
AKR/J MGP_AKRJ_G0024199
protein coding gene Chr18:33726930-33731817 (-)
BALB/cJ MGP_BALBcJ_G0024231
protein coding gene Chr18:32848340-32853227 (-)
C3H/HeJ MGP_C3HHeJ_G0023998
protein coding gene Chr18:33753380-33758267 (-)
C57BL/6NJ MGP_C57BL6NJ_G0024672
protein coding gene Chr18:35192074-35196961 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0022112
protein coding gene Chr18:32907957-32912855 (-)
CAST/EiJ MGP_CASTEiJ_G0023473
protein coding gene Chr18:33740479-33745363 (-)
CBA/J MGP_CBAJ_G0023966
protein coding gene Chr18:36203473-36208360 (-)
DBA/2J MGP_DBA2J_G0024098
protein coding gene Chr18:32435597-32440484 (-)
FVB/NJ MGP_FVBNJ_G0024065
protein coding gene Chr18:32121717-32126604 (-)
LP/J MGP_LPJ_G0024180
protein coding gene Chr18:34025819-34030706 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0024093
protein coding gene Chr18:37441043-37445930 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0024721
protein coding gene Chr18:33564766-33569653 (-)
PWK/PhJ MGP_PWKPhJ_G0023217
protein coding gene Chr18:32659163-32664047 (-)
SPRET/EiJ MGP_SPRETEiJ_G0023024
protein coding gene Chr18:33828166-33833070 (-)
WSB/EiJ MGP_WSBEiJ_G0023536
protein coding gene Chr18:33485267-33490154 (-)



Homology
more
  • Human Ortholog
    PROB1, proline rich basic protein 1
  • Vertebrate Orthologs
    7
  • Human Ortholog
    PROB1, proline rich basic protein 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C5orf65
  • Links
    NCBI Gene ID: 389333
    neXtProt AC: NX_E7EW31
    UniProt: E7EW31

  • Chr Location
    5q31.2; chr5:139391946-139395196 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 381148 NCBI Gene Model | MGI Sequence Detail 4849 C57BL/6J ±  kb
transcript NM_001270646 RefSeq | MGI Sequence Detail 4875 C57BL/6  
polypeptide NP_001257575 RefSeq | MGI Sequence Detail 1010 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR027838 Domain of unknown function DUF4585
Molecular
Reagents
less
  • All nucleic 9
    cDNA 9

    Microarray probesets 3
References
more
  • Summaries
    All 16
    Developmental Gene Expression 1
  • Earliest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory