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Frmd7
Gene Detail
Symbol

Name
ID
Frmd7
FERM domain containing 7
MGI:2686379
Synonyms
EG665849, LOC385354
Feature Type
protein coding gene
Genetic Map
Chromosome X
27.82 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
ChrX:50895180-50942710 bp, - strand
From VEGA annotation of GRCm38

  47531 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:18855  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Frmd7

Human
homologs
Human Homolog FRMD7, FERM domain containing 7
NCBI Gene ID 90167
neXtProt AC  NX_Q6ZUT3
Human Synonyms  NYS, NYS1, XIPAN
Human Chr (Location)  Xq26.2; chrX:132076993-132128022 (-)  GRCh38
Disease Associations  (1) Diseases Associated with Human FRMD7
Mutations,
alleles, and
phenotypes
All mutations/alleles(1) : Targeted(1)
Interactions
Frmd7 interacts with 329 markers (Mir1b, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (9 annotations)
Process nervous system development, regulation of neuron projection development
Component cell projection, cytoskeleton, ...
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (2 records)
Data Summary: Results (51)    Tissues (43)    Tissue x Stage Matrix (view)
Assay TypeResults
Immunohistochemistry 6
Western blot 9
RT-PCR 36
cDNA source data(3)
External Resources: GEO   Expression Atlas
Molecular
reagents
All nucleic(4) cDNA(3) Primer pair(1)
Microarray probesets(1)
Other database
links
VEGA Gene ModelOTTMUSG00000017472 (Evidence)
Ensembl Gene ModelENSMUSG00000036131 (Evidence)
Entrez Gene385354 (Evidence)
UniGene393050
DoTSDT.530334
NIA Mouse Gene IndexU053729
Consensus CDS ProjectCCDS53067.1
International Mouse Knockout Project StatusFrmd7
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000017472 VEGA Gene Model | MGI Sequence Detail 47531 C57BL/6J ±  kb
transcript OTTMUST00000042424 VEGA | MGI Sequence Detail 2112 Not Applicable 
polypeptide OTTMUSP00000019068 VEGA | MGI Sequence Detail 703 Not Applicable 

For the selected sequences
All sequences(30) RefSeq(12) UniProt(2)
Polymorphisms
SNPs within 2kb(140 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR019749 Band 4.1 domain
InterPro IPR019750 Band 4.1 family
InterPro IPR014352 FERM/acyl-CoA-binding protein, 3-helical bundle
InterPro IPR014847 FERM adjacent (FA)
InterPro IPR019748 FERM central domain
InterPro IPR019747 FERM conserved site
InterPro IPR018980 FERM, C-terminal PH-like domain
InterPro IPR000299 FERM domain
InterPro IPR018979 FERM, N-terminal
InterPro IPR011993 Pleckstrin homology-like domain
Protein Ontology PR:000007667 FERM domain-containing protein 7
References
(Earliest) J:118180 Ortholog Assertions from Comparison of Orthology Predictions via HCOP at HGNC, HCOP Orthology Load. 2007;
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(26)
Other
accession IDs
MGI:3643612

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory