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Trav6d-7 Gene Detail
Summary
  • Symbol
    Trav6d-7
  • Name
    T cell receptor alpha variable 6D-7
  • Synonyms
    LOC385047
  • Feature Type
    gene segment
  • IDs
    MGI:2686335
    NCBI Gene: 385047
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr14:53245089-53245555 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 14, 27.18 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • Strain Annotations
    7
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2686335
 gene segment Chr14:53245069-53245555 (+)
129S1/SvImJ no annotation
A/J MGP_AJ_G0002507
 gene segment Chr14:45870317-45870803 (+)
AKR/J no annotation
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ no annotation
CAROLI/EiJ MGP_CAROLIEiJ_G0002231
 gene segment Chr14:45100043-45100534 (-)
CAST/EiJ MGP_CASTEiJ_G0002471
 gene segment Chr14:44340193-44340679 (+)
CBA/J no annotation
DBA/2J no annotation
FVB/NJ no annotation
LP/J no annotation
NOD/ShiLtJ MGP_NODShiLtJ_G0002464
 gene segment Chr14:50130931-50131417 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0002668
 gene segment Chr14:47559808-47561155 (+)
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0002378
 gene segment Chr14:43351738-43352224 (+)
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    TRAV9-2, T cell receptor alpha variable 9-2
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TRAV9-2, T cell receptor alpha variable 9-2
  • Synonyms
    TCRAV22S1, TCRAV9S2, TRAV92
  • Links
    NCBI Gene ID: 28677
    UniProt: A0A087WT02

  • Chr Location
    14q11.2; chr14:21941128-21941657 (+)  GRCh38
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    14
  • RefSeq
    2
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 385047 NCBI Gene Model | MGI Sequence Detail 467 C57BL/6J ±  kb
polypeptide A0A075B6B0 UniProt | EBI | MGI Sequence Detail 112 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR007110 Immunoglobulin-like domain
    IPR036179 Immunoglobulin-like domain superfamily
    IPR013783 Immunoglobulin-like fold
    IPR013106 Immunoglobulin V-set domain
Molecular
Reagents
less

  • Microarray probesets 2
References
more
  • Summaries
    All 8
  • Earliest
    J:164272 Giudicelli V, et al., IMGT/GENE-DB: a comprehensive database for human and mouse immunoglobulin and T cell receptor genes. Nucleic Acids Res. 2005 Jan 1;33(Database issue):D256-61
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/30/2024
MGI 6.23 		The Jackson Laboratory