About   Help   FAQ
Wdr88 Gene Detail
Summary
  • Symbol
    Wdr88
  • Name
    WD repeat domain 88
  • Synonyms
    LOC384605, Pqwd
  • Feature Type
    protein coding gene
  • IDs
    MGI:2686275
    NCBI Gene: 384605
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr7:35238791-35275533 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 21.21 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    239 from dbSNP Build 142
  • Strain Annotations
    1
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2686275
protein coding gene Chr7:35236233-35275556 (-)
129S1/SvImJ no annotation
A/J no annotation
AKR/J no annotation
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ no annotation
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J no annotation
FVB/NJ no annotation
LP/J no annotation
NOD/ShiLtJ no annotation
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    WDR88, WD repeat domain 88
  • Vertebrate Orthologs
    9
  • Human Ortholog
    WDR88, WD repeat domain 88
    Orthology source: HomoloGene, HGNC
  • Synonyms
    PQWD
  • Links
    NCBI Gene ID: 126248
    neXtProt AC: NX_Q6ZMY6
    UniProt: Q6ZMY6

  • Chr Location
    19q13.11; chr19:33132092-33175799 (+)  GRCh38.p7

Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000118454 Ensembl Gene Model | MGI Sequence Detail 36743 C57BL/6J ±  kb
transcript ENSMUST00000238407 Ensembl | MGI Sequence Detail 1944 Not Applicable  
polypeptide ENSMUSP00000158765 Ensembl | MGI Sequence Detail 565 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR020472 G-protein beta WD-40 repeat
    IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat
    IPR002372 Pyrrolo-quinoline quinone repeat
    IPR001680 WD40 repeat
    IPR019775 WD40 repeat, conserved site
    IPR017986 WD40-repeat-containing domain
    IPR036322 WD40-repeat-containing domain superfamily
    IPR015943 WD40/YVTN repeat-like-containing domain superfamily
References
more
  • Summaries
    All 7
  • Earliest
    J:23000 MGD Nomenclature Committee, 2/14/1995;
  • Latest
    J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
01/12/2021
MGI 6.16
The Jackson Laboratory