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Fam47e Gene Detail
Summary
  • Symbol
    Fam47e
  • Name
    family with sequence similarity 47, member E
  • Synonyms
    Gm1381, LOC384198
  • Feature Type
    protein coding gene
  • IDs
    MGI:2686227
    NCBI Gene: 384198
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:92555069-92591279 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 47.09 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    473 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2686227
protein coding gene Chr5:92554953-92591285 (+)
129S1/SvImJ MGP_129S1SvImJ_G0029753
protein coding gene Chr5:93744991-93781570 (+)
A/J MGP_AJ_G0029719
protein coding gene Chr5:90017176-90053343 (+)
AKR/J MGP_AKRJ_G0029665
protein coding gene Chr5:92978580-93015142 (+)
BALB/cJ MGP_BALBcJ_G0029729
protein coding gene Chr5:90894889-90931085 (+)
C3H/HeJ MGP_C3HHeJ_G0029452
protein coding gene Chr5:93365743-93403080 (+)
C57BL/6NJ MGP_C57BL6NJ_G0030183
protein coding gene Chr5:97458870-97496765 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0027419
protein coding gene Chr5:85655535-85687661 (+)
CAST/EiJ MGP_CASTEiJ_G0028862
protein coding gene Chr5:92739845-92781549 (+)
CBA/J MGP_CBAJ_G0029422
protein coding gene Chr5:100855751-100895570 (+)
DBA/2J MGP_DBA2J_G0029566
protein coding gene Chr5:90061534-90093979 (+)
FVB/NJ MGP_FVBNJ_G0029525
protein coding gene Chr5:88915375-88954333 (+)
LP/J MGP_LPJ_G0029654
protein coding gene Chr5:94104005-94143589 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0029554
protein coding gene Chr5:105754569-105792211 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0030217
protein coding gene Chr5:92494574-92531997 (+)
PWK/PhJ MGP_PWKPhJ_G0028581
protein coding gene Chr5:89123013-89160226 (+)
SPRET/EiJ MGP_SPRETEiJ_G0028416
protein coding gene Chr5:91842679-91878340 (+)
WSB/EiJ MGP_WSBEiJ_G0028941
protein coding gene Chr5:92955838-92995388 (+)



Homology
more
  • Human Ortholog
    FAM47E, family with sequence similarity 47 member E
  • Vertebrate Orthologs
    10
  • Human Ortholog
    FAM47E, family with sequence similarity 47 member E
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 100129583
    neXtProt AC: NX_Q6ZV65
    UniProt: Q6ZV65

  • Chr Location
    4q21.1; chr4:76214040-76283783 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000057068 Ensembl Gene Model | MGI Sequence Detail 36211 C57BL/6J ±  kb
transcript ENSMUST00000146417 Ensembl | MGI Sequence Detail 1357 Not Applicable  
polypeptide ENSMUSP00000115229 Ensembl | MGI Sequence Detail 402 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    9 Sequences
  • InterPro Domains
    IPR032743 FAM47 family
Molecular
Reagents
less
  • All nucleic 8
    cDNA 8

    Microarray probesets 1
References
more
  • Summaries
    All 24
    Gene Ontology 1
    Phenotypes 10
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory