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Fam47e Gene Detail
Summary
  • Symbol
    Fam47e
  • Name
    family with sequence similarity 47, member E
  • Synonyms
    Gm1381, LOC384198
  • Feature Type
    protein coding gene
  • IDs
    MGI:2686227
    NCBI Gene: 384198
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:92555069-92591279 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 47.09 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    473 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2686227
protein coding gene Chr5:92554960-92591285 (+)
129S1/SvImJ MGP_129S1SvImJ_G0029753
protein coding gene Chr5:93744991-93781570 (+)
A/J MGP_AJ_G0029719
protein coding gene Chr5:90017176-90053343 (+)
AKR/J MGP_AKRJ_G0029665
protein coding gene Chr5:92978580-93015142 (+)
BALB/cJ MGP_BALBcJ_G0029729
protein coding gene Chr5:90894889-90931085 (+)
C3H/HeJ MGP_C3HHeJ_G0029452
protein coding gene Chr5:93365743-93403080 (+)
C57BL/6NJ MGP_C57BL6NJ_G0030183
protein coding gene Chr5:97458870-97496765 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0027419
protein coding gene Chr5:85655535-85687661 (+)
CAST/EiJ MGP_CASTEiJ_G0028862
protein coding gene Chr5:92739845-92781549 (+)
CBA/J MGP_CBAJ_G0029422
protein coding gene Chr5:100855751-100895570 (+)
DBA/2J MGP_DBA2J_G0029566
protein coding gene Chr5:90061534-90093979 (+)
FVB/NJ MGP_FVBNJ_G0029525
protein coding gene Chr5:88915375-88954333 (+)
LP/J MGP_LPJ_G0029654
protein coding gene Chr5:94104005-94143589 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0029554
protein coding gene Chr5:105754569-105792211 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0030217
protein coding gene Chr5:92494574-92531997 (+)
PWK/PhJ MGP_PWKPhJ_G0028581
protein coding gene Chr5:89123013-89160226 (+)
SPRET/EiJ MGP_SPRETEiJ_G0028416
protein coding gene Chr5:91842679-91878340 (+)
WSB/EiJ MGP_WSBEiJ_G0028941
protein coding gene Chr5:92955838-92995388 (+)



Homology
more
  • Human Ortholog
    FAM47E, family with sequence similarity 47 member E
  • Vertebrate Orthologs
    10
  • Human Ortholog
    FAM47E, family with sequence similarity 47 member E
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 100129583
    neXtProt AC: NX_Q6ZV65
    UniProt: Q6ZV65

  • Chr Location
    4q21.1; chr4:76214040-76283783 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000057068 Ensembl Gene Model | MGI Sequence Detail 36211 C57BL/6J ±  kb
transcript ENSMUST00000146417 Ensembl | MGI Sequence Detail 1357 Not Applicable  
polypeptide ENSMUSP00000115229 Ensembl | MGI Sequence Detail 402 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    9 Sequences
  • InterPro Domains
    IPR032743 FAM47 family
Molecular
Reagents
less
  • All nucleic 8
    cDNA 8

    Microarray probesets 1
References
more
  • Summaries
    All 24
    Gene Ontology 1
    Phenotypes 10
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
06/30/2020
MGI 6.15
The Jackson Laboratory