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A830080D01Rik Gene Detail
Summary
  • Symbol
    A830080D01Rik
  • Name
    RIKEN cDNA A830080D01 gene
  • Synonyms
    2310067E24Rik, LOC382252
  • Feature Type
    protein coding gene
  • IDs
    MGI:2685992
    NCBI Gene: 382252
Location & Maps
more
  • Sequence Map
    ChrX:159526688-159593081 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      66394 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome X, 73.55 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    CXorf23, chromosome X open reading frame 23
  • Vertebrate Orthologs
    9
  • Human Ortholog
    CXorf23, chromosome X open reading frame 23
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 256643
    neXtProt AC: NX_A2AJT9

  • Chr Location
    Xp22.12; chrX:19912860-19990934 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    1 phenotype from 2 alleles in 1 genetic background
    4 images
    12 phenotype references
  • All Mutations and Alleles
    146
  • Gene trapped
    142
  • Radiation induced
    1
  • Spontaneous
    1
  • Targeted
    2
  • Genomic Mutations
    2 involving A830080D01Rik
  • Incidental Mutations
    APF
Male chimeras hemizygous for either of two different gene trapped alleles of this gene appear normal at E8.5.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000019441 VEGA Gene Model | MGI Sequence Detail 66394 C57BL/6J ±  kb
transcript OTTMUST00000046417 VEGA | MGI Sequence Detail 3366 Not Applicable  
polypeptide OTTMUSP00000020956 VEGA | MGI Sequence Detail 752 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    112 from dbSNP Build 142
Protein
Information
less
  • UniProt
    3 Sequences
  • InterPro Domains
    IPR029199 THRAP3/BCLAF1 family
Molecular
Reagents
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  • All nucleic 47
    Genomic 1
    cDNA 46

    Microarray probesets 5
Other
Accession IDs
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MGI:1916899
References
more
  • Summaries
    All 30
    Developmental Gene Expression 1
    Gene Ontology 1
    Phenotypes 12
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/22/2016
MGI 6.06
The Jackson Laboratory