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Cpxcr1 Gene Detail
Summary
  • Symbol
    Cpxcr1
  • Name
    CPX chromosome region, candidate 1
  • Synonyms
    LOC382239
  • Feature Type
    protein coding gene
  • IDs
    MGI:2685989
    NCBI Gene: 382239
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:116448944-116478783 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome X, 49.48 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    153 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2685989
protein coding gene ChrX:116448944-116478783 (+)
129S1/SvImJ MGP_129S1SvImJ_G0036041
protein coding gene ChrX:113243444-113266729 (+)
A/J MGP_AJ_G0036022
protein coding gene ChrX:113001021-113022826 (+)
AKR/J MGP_AKRJ_G0035940
protein coding gene ChrX:116575693-116600445 (+)
BALB/cJ MGP_BALBcJ_G0036014
protein coding gene ChrX:111493056-111517714 (+)
C3H/HeJ MGP_C3HHeJ_G0035718
protein coding gene ChrX:113618060-113657925 (+)
C57BL/6NJ MGP_C57BL6NJ_G0036538
protein coding gene ChrX:116567443-116593467 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0033364
protein coding gene ChrX:109356624-109385289 (+)
CAST/EiJ MGP_CASTEiJ_G0035005
protein coding gene ChrX:97405472-97430317 (+)
CBA/J MGP_CBAJ_G0035694
protein coding gene ChrX:120260592-120297219 (+)
DBA/2J MGP_DBA2J_G0035847
protein coding gene ChrX:112236395-112267610 (+)
FVB/NJ MGP_FVBNJ_G0035790
protein coding gene ChrX:111636072-111667475 (+)
LP/J MGP_LPJ_G0035940
protein coding gene ChrX:114161655-114192639 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0035819
protein coding gene ChrX:126022946-126062234 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0036565
protein coding gene ChrX:112766583-112797843 (+)
PWK/PhJ MGP_PWKPhJ_G0034700
protein coding gene ChrX:94763702-94790156 (+)
SPRET/EiJ MGP_SPRETEiJ_G0034531
protein coding gene ChrX:98153016-98172923 (+)
WSB/EiJ MGP_WSBEiJ_G0035143
protein coding gene ChrX:111481494-111504668 (+)



Homology
more
  • Human Ortholog
    CPXCR1, CPX chromosome region candidate 1
  • Vertebrate Orthologs
    4
  • Human Ortholog
    CPXCR1, CPX chromosome region candidate 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    CT77
  • Links
    NCBI Gene ID: 53336
    neXtProt AC: NX_Q8N123
    UniProt: Q8N123

  • Chr Location
    Xq21.31; chrX:88747225-88754785 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 382239 NCBI Gene Model | MGI Sequence Detail 29840 C57BL/6J ±  kb
transcript NM_001033471 RefSeq | MGI Sequence Detail 1596 C57BL/6  
polypeptide Q3V0P1 UniProt | EBI | MGI Sequence Detail 322 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000005839 CPX chromosomal region candidate gene 1 protein
  • InterPro Domains
    IPR039710 CPX chromosomal region candidate gene 1 protein
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 1
References
more
  • Summaries
    All 15
  • Earliest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
11/26/2019
MGI 6.14
The Jackson Laboratory