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Cpxcr1 Gene Detail
Summary
  • Symbol
    Cpxcr1
  • Name
    CPX chromosome region, candidate 1
  • Synonyms
    LOC382239
  • Feature Type
    protein coding gene
  • IDs
    MGI:2685989
    NCBI Gene: 382239
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:116448944-116478783 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome X, 49.48 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    153 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2685989
protein coding gene ChrX:116448944-116478783 (+)
129S1/SvImJ MGP_129S1SvImJ_G0036041
protein coding gene ChrX:113243444-113266729 (+)
A/J MGP_AJ_G0036022
protein coding gene ChrX:113001021-113022826 (+)
AKR/J MGP_AKRJ_G0035940
protein coding gene ChrX:116575693-116600445 (+)
BALB/cJ MGP_BALBcJ_G0036014
protein coding gene ChrX:111493056-111517714 (+)
C3H/HeJ MGP_C3HHeJ_G0035718
protein coding gene ChrX:113618060-113657925 (+)
C57BL/6NJ MGP_C57BL6NJ_G0036538
protein coding gene ChrX:116567443-116593467 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0033364
protein coding gene ChrX:109356624-109385289 (+)
CAST/EiJ MGP_CASTEiJ_G0035005
protein coding gene ChrX:97405472-97430317 (+)
CBA/J MGP_CBAJ_G0035694
protein coding gene ChrX:120260592-120297219 (+)
DBA/2J MGP_DBA2J_G0035847
protein coding gene ChrX:112236395-112267610 (+)
FVB/NJ MGP_FVBNJ_G0035790
protein coding gene ChrX:111636072-111667475 (+)
LP/J MGP_LPJ_G0035940
protein coding gene ChrX:114161655-114192639 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0035819
protein coding gene ChrX:126022946-126062234 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0036565
protein coding gene ChrX:112766583-112797843 (+)
PWK/PhJ MGP_PWKPhJ_G0034700
protein coding gene ChrX:94763702-94790156 (+)
SPRET/EiJ MGP_SPRETEiJ_G0034531
protein coding gene ChrX:98153016-98172923 (+)
WSB/EiJ MGP_WSBEiJ_G0035143
protein coding gene ChrX:111481494-111504668 (+)



Homology
more
  • Human Ortholog
    CPXCR1, CPX chromosome region candidate 1
  • Vertebrate Orthologs
    4
  • Human Ortholog
    CPXCR1, CPX chromosome region candidate 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    CT77
  • Links
    NCBI Gene ID: 53336
    neXtProt AC: NX_Q8N123
    UniProt: Q8N123

  • Chr Location
    Xq21.31; chrX:88747225-88754785 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 382239 NCBI Gene Model | MGI Sequence Detail 29840 C57BL/6J ±  kb
transcript NM_001033471 RefSeq | MGI Sequence Detail 1596 C57BL/6  
polypeptide Q3V0P1 UniProt | EBI | MGI Sequence Detail 322 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000005839 CPX chromosomal region candidate gene 1 protein
  • InterPro Domains
    IPR039710 CPX chromosomal region candidate gene 1 protein
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 1
References
more
  • Summaries
    All 15
  • Earliest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
08/04/2020
MGI 6.15
The Jackson Laboratory