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Apold1 Gene Detail
Summary
  • Symbol
    Apold1
  • Name
    apolipoprotein L domain containing 1
  • Synonyms
    LOC381823
  • Feature Type
    protein coding gene
  • IDs
    MGI:2685921
    NCBI Gene: 381823
  • Gene Overview
    MyGene.info: APOLD1
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:134982001-134986836 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 65.77 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    97 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2685921
protein coding gene Chr6:134981718-134986836 (.)
129S1/SvImJ MGP_129S1SvImJ_G0031411
protein coding gene Chr6:139288446-139293604 (+)
A/J MGP_AJ_G0031387
protein coding gene Chr6:133816796-133821952 (+)
AKR/J MGP_AKRJ_G0031314
protein coding gene Chr6:137877525-137882681 (+)
BALB/cJ MGP_BALBcJ_G0031393
protein coding gene Chr6:133631631-133636787 (+)
C3H/HeJ MGP_C3HHeJ_G0031115
protein coding gene Chr6:137920543-137925699 (+)
C57BL/6NJ MGP_C57BL6NJ_G0031853
protein coding gene Chr6:143071388-143076505 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0028985
protein coding gene Chr6:132961208-132966549 (+)
CAST/EiJ MGP_CASTEiJ_G0030484
protein coding gene Chr6:137344523-137349683 (+)
CBA/J MGP_CBAJ_G0031074
protein coding gene Chr6:148414052-148419208 (+)
DBA/2J MGP_DBA2J_G0031232
protein coding gene Chr6:132668466-132673622 (+)
FVB/NJ MGP_FVBNJ_G0031182
protein coding gene Chr6:131581098-131586226 (+)
LP/J MGP_LPJ_G0031316
protein coding gene Chr6:139392817-139397975 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0031222
protein coding gene Chr6:152455984-152461140 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0031886
protein coding gene Chr6:137617239-137622395 (+)
PWK/PhJ MGP_PWKPhJ_G0030209
protein coding gene Chr6:131159651-131164853 (+)
SPRET/EiJ MGP_SPRETEiJ_G0030033
protein coding gene Chr6:135802887-135807942 (+)
WSB/EiJ MGP_WSBEiJ_G0030575
protein coding gene Chr6:138256869-138262023 (+)



Homology
more
  • Human Ortholog
    APOLD1, apolipoprotein L domain containing 1
  • Vertebrate Orthologs
    9
  • Human Ortholog
    APOLD1, apolipoprotein L domain containing 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    VERGE
  • Links
    NCBI Gene ID: 81575
    neXtProt AC: NX_Q96LR9
    UniProt: Q96LR9

  • Chr Location
    12p13.1; chr12:12725917-12791466 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 381823 NCBI Gene Model | MGI Sequence Detail 4836 C57BL/6J ±  kb
transcript NM_001109914 RefSeq | MGI Sequence Detail 3284 C57BL/6  
polypeptide NP_001103384 RefSeq | MGI Sequence Detail 246 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR008405 Apolipoprotein L
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 1
References
more
  • Summaries
    All 17
    Developmental Gene Expression 1
    Gene Ontology 3
    Phenotypes 2
  • Earliest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory