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Ccdc27 Gene Detail
Summary
  • Symbol
    Ccdc27
  • Name
    coiled-coil domain containing 27
  • Synonyms
    LOC381580
  • Feature Type
    protein coding gene
  • IDs
    MGI:2685881
    NCBI Gene: 381580
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:154026644-154042677 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 83.79 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    79 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2685881
protein coding gene Chr4:154026639-154042677 (-)
129S1/SvImJ MGP_129S1SvImJ_G0029190
protein coding gene Chr4:158260930-158286419 (-)
A/J MGP_AJ_G0029155
protein coding gene Chr4:151629386-151645032 (-)
AKR/J MGP_AKRJ_G0029103
protein coding gene Chr4:155761223-155776894 (-)
BALB/cJ MGP_BALBcJ_G0029171
protein coding gene Chr4:152096897-152112583 (-)
C3H/HeJ MGP_C3HHeJ_G0028892
protein coding gene Chr4:156297480-156314113 (-)
C57BL/6NJ MGP_C57BL6NJ_G0029620
protein coding gene Chr4:163926636-163944003 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0026866
protein coding gene Chr4:143931186-143946686 (-)
CAST/EiJ MGP_CASTEiJ_G0028305
protein coding gene Chr4:153695586-153711633 (-)
CBA/J MGP_CBAJ_G0028854
protein coding gene Chr4:168850667-168866346 (-)
DBA/2J MGP_DBA2J_G0029003
protein coding gene Chr4:151655460-151671586 (-)
FVB/NJ MGP_FVBNJ_G0028967
protein coding gene Chr4:150855403-150872330 (-)
LP/J MGP_LPJ_G0029093
protein coding gene Chr4:158176566-158192382 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0028994
protein coding gene Chr4:171770427-171789388 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0029652
protein coding gene Chr4:156331126-156346864 (-)
PWK/PhJ MGP_PWKPhJ_G0028025
protein coding gene Chr4:147731639-147748579 (-)
SPRET/EiJ MGP_SPRETEiJ_G0027859
protein coding gene Chr4:150617795-150634311 (-)
WSB/EiJ MGP_WSBEiJ_G0028385
protein coding gene Chr4:156494747-156512317 (-)



Homology
more
  • Human Ortholog
    CCDC27, coiled-coil domain containing 27
  • Vertebrate Orthologs
    7
  • Human Ortholog
    CCDC27, coiled-coil domain containing 27
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 148870
    neXtProt AC: NX_Q2M243
    UniProt: Q2M243

  • Chr Location
    1p36.32; chr1:3752398-3771645 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 381580 NCBI Gene Model | MGI Sequence Detail 16034 C57BL/6J ±  kb
transcript NM_001033455 RefSeq | MGI Sequence Detail 2084 C57BL/6  
polypeptide Q3V036 UniProt | EBI | MGI Sequence Detail 639 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 2
References
more
  • Summaries
    All 20
    Phenotypes 3
  • Earliest
    J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
  • Latest
    J:196071 van der Weyden L, et al., Cancer of mice and men: old twists and new tails. J Pathol. 2013 May;230(1):4-16

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/01/2019
MGI 6.14
The Jackson Laboratory