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Cdh26 Gene Detail
Summary
  • Symbol
    Cdh26
  • Name
    cadherin-like 26
  • Synonyms
    LOC381409
  • Feature Type
    protein coding gene
  • IDs
    MGI:2685856
    NCBI Gene: 381409
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr2:178430531-178487366 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 99.94 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    371 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2685856
protein coding gene Chr2:178430515-178487366 (+)
129S1/SvImJ MGP_129S1SvImJ_G0026979
protein coding gene Chr2:184861564-184917685 (+)
A/J MGP_AJ_G0026945
protein coding gene Chr2:177248667-177303260 (+)
AKR/J MGP_AKRJ_G0026915
protein coding gene Chr2:182548557-182603712 (+)
BALB/cJ MGP_BALBcJ_G0026954
protein coding gene Chr2:177727386-177778670 (+)
C3H/HeJ MGP_C3HHeJ_G0026695
protein coding gene Chr2:182935192-182992059 (+)
C57BL/6NJ MGP_C57BL6NJ_G0027400
protein coding gene Chr2:190225202-190277921 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0026154
protein coding gene Chr2:181160448-181212275 (+)
CBA/J MGP_CBAJ_G0026672
protein coding gene Chr2:197118004-197170590 (+)
DBA/2J MGP_DBA2J_G0026810
protein coding gene Chr2:176372979-176422980 (+)
FVB/NJ MGP_FVBNJ_G0026776
protein coding gene Chr2:174958751-175009489 (+)
LP/J MGP_LPJ_G0026909
protein coding gene Chr2:184807799-184889641 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0026795
protein coding gene Chr2:199824518-199878529 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0027459
protein coding gene Chr2:182520779-182577162 (+)
PWK/PhJ MGP_PWKPhJ_G0025890
protein coding gene Chr2:173845551-173900669 (+)
SPRET/EiJ MGP_SPRETEiJ_G0025690
protein coding gene Chr2:178980426-179032603 (+)
WSB/EiJ MGP_WSBEiJ_G0026226
protein coding gene Chr2:183506879-183559872 (+)



Homology
more
  • Human Ortholog
    CDH26, cadherin 26
  • Vertebrate Orthologs
    9
  • Human Ortholog
    CDH26, cadherin 26
    Orthology source: HomoloGene, HGNC
  • Synonyms
    VR20
  • Links
    NCBI Gene ID: 60437
    neXtProt AC: NX_Q8IXH8
    UniProt: Q8IXH8

  • Chr Location
    20q13.33; chr20:59957764-60035629 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000039155 Ensembl Gene Model | MGI Sequence Detail 56836 C57BL/6J ±  kb
transcript ENSMUST00000042092 Ensembl | MGI Sequence Detail 2891 Not Applicable  
polypeptide ENSMUSP00000048829 Ensembl | MGI Sequence Detail 763 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 5
References
more
  • Summaries
    All 31
    Developmental Gene Expression 4
    Gene Ontology 4
    Phenotypes 7
  • Earliest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
  • Latest
    J:270523 Desgrange A, et al., HNF1B controls epithelial organization and cell polarity during ureteric bud branching and collecting duct morphogenesis. Development. 2017 Dec 15;144(24):4704-4719

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/01/2019
MGI 6.14
The Jackson Laboratory