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Bpifb4 Gene Detail
Summary
  • Symbol
    Bpifb4
  • Name
    BPI fold containing family B, member 4
  • Synonyms
    Gm1006, LOC381399
  • Feature Type
    protein coding gene
  • IDs
    MGI:2685852
    NCBI Gene: 381399
  • Gene Overview
    MyGene.info: BPIFB4
Location & Maps
more
  • Sequence Map
    Chr2:153938212-153964101 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      25890 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 75.99 cM
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    BPIFB4, BPI fold containing family B member 4
  • Vertebrate Orthologs
    7
  • Human Ortholog
    BPIFB4, BPI fold containing family B member 4
    Orthology source: HGNC, HomoloGene
  • Synonyms
    C20orf186, dJ726C3.5, LPLUNC4, RY2G5
  • Links
    NCBI Gene ID: 149954
    neXtProt AC: NX_P59827

  • Chr Location
    20q11.21; chr20:33081512-33111751 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    6
  • Gene trapped
    1
  • Targeted
    5
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000016848 VEGA Gene Model | MGI Sequence Detail 25890 C57BL/6J ±  kb
transcript OTTMUST00000040930 VEGA | MGI Sequence Detail 2420 Not Applicable  
polypeptide OTTMUSP00000018312 VEGA | MGI Sequence Detail 617 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    611 from dbSNP Build 142
Protein
Information
less
  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000009900 BPI fold-containing family B member 4
  • InterPro Domains
    IPR017943 Bactericidal permeability-increasing protein, alpha/beta domain
    IPR032942 BPI/LBP/Plunc family
    IPR001124 Lipid-binding serum glycoprotein, C-terminal
    IPR017942 Lipid-binding serum glycoprotein, N-terminal
Molecular
Reagents
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  • All nucleic 10
    cDNA 10

    Microarray probesets 1
References
more
  • Summaries
    All 20
    Gene Ontology 2
    Phenotypes 5
  • Earliest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
  • Latest
    J:174122 Bingle CD, et al., Systematic nomenclature for the PLUNC/PSP/BSP30/SMGB proteins as a subfamily of the BPI fold-containing superfamily. Biochem Soc Trans. 2011 Aug 1;39(4):977-83

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
07/12/2016
MGI 6.04
The Jackson Laboratory