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Slc22a20 Gene Detail
Summary
  • Symbol
    Slc22a20
  • Name
    solute carrier family 22 (organic anion transporter), member 20
  • Synonyms
    LOC381203, mOAT6
  • Feature Type
    protein coding gene
  • IDs
    MGI:2685809
    NCBI Gene: 381203
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr19:5970234-5986143 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 19, 4.34 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    66 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2685809
protein coding gene Chr19:5970234-5986143 (-)
129S1/SvImJ MGP_129S1SvImJ_G0024735
protein coding gene Chr19:2989375-3008115 (-)
A/J MGP_AJ_G0024701
protein coding gene Chr19:2822216-2839947 (-)
AKR/J MGP_AKRJ_G0024674
protein coding gene Chr19:2904107-2921876 (-)
BALB/cJ MGP_BALBcJ_G0024701
protein coding gene Chr19:2814191-2836688 (-)
C3H/HeJ MGP_C3HHeJ_G0024469
protein coding gene Chr19:2921992-2942271 (-)
C57BL/6NJ MGP_C57BL6NJ_G0025148
protein coding gene Chr19:3048433-3071235 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0022581
protein coding gene Chr19:2751661-2768781 (-)
CAST/EiJ MGP_CASTEiJ_G0023941
protein coding gene Chr19:2928284-2950502 (-)
CBA/J MGP_CBAJ_G0024441
protein coding gene Chr19:3190425-3215518 (-)
DBA/2J MGP_DBA2J_G0024568
protein coding gene Chr19:2811234-2826537 (-)
FVB/NJ MGP_FVBNJ_G0024534
protein coding gene Chr19:2815435-2836222 (-)
LP/J MGP_LPJ_G0024654
protein coding gene Chr19:2961456-2981334 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0024564
protein coding gene Chr19:3007622-3027241 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0025196
protein coding gene Chr19:2920673-2947473 (-)
PWK/PhJ MGP_PWKPhJ_G0023687
protein coding gene Chr19:2834897-2851410 (-)
SPRET/EiJ MGP_SPRETEiJ_G0023492
protein coding gene Chr19:2903477-2917974 (-)
WSB/EiJ MGP_WSBEiJ_G0024003
protein coding gene Chr19:2938652-2955788 (-)



Homology
more
  • Human Ortholog
    SLC22A20P, solute carrier family 22 member 20, pseudogene
  • Vertebrate Orthologs
    5
  • Human Ortholog
    SLC22A20P, solute carrier family 22 member 20, pseudogene
    Orthology source: HGNC
  • Synonyms
    Oat6, SLC22A20
  • Links
    NCBI Gene ID: 440044
    UniProt: A6NK97

  • Chr Location
    11q13.1; chr11:65213840-65243108 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 381203 NCBI Gene Model | MGI Sequence Detail 15910 C57BL/6J ±  kb
transcript NM_198650 RefSeq | MGI Sequence Detail 1897 C57BL/6  
polypeptide Q80UJ1 UniProt | EBI | MGI Sequence Detail 556 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR005828 Major facilitator, sugar transporter-like
    IPR020846 Major facilitator superfamily domain
    IPR036259 MFS transporter superfamily
Molecular
Reagents
less
  • All nucleic 8
    cDNA 6
    Primer pair 2

    Microarray probesets 1
References
more
  • Summaries
    All 24
    Developmental Gene Expression 2
    Gene Ontology 3
    Phenotypes 4
  • Earliest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory