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Prickle4 Gene Detail
Summary
  • Symbol
    Prickle4
  • Name
    prickle planar cell polarity protein 4
  • Synonyms
    LOC381104
  • Feature Type
    protein coding gene
  • IDs
    MGI:2685785
    NCBI Gene: 381104
  • Gene Overview
    MyGene.info: PRICKLE4
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr17:47688517-47694736 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 17, 23.87 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    2 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2685785
protein coding gene Chr17:47688474-47694959 (-)
129S1/SvImJ MGP_129S1SvImJ_G0023854
protein coding gene Chr17:48898331-48904538 (-)
A/J MGP_AJ_G0023814
protein coding gene Chr17:47640529-47646745 (-)
AKR/J MGP_AKRJ_G0023783
protein coding gene Chr17:48058675-48064888 (-)
BALB/cJ MGP_BALBcJ_G0023816
protein coding gene Chr17:47553555-47559772 (-)
C3H/HeJ MGP_C3HHeJ_G0023579
protein coding gene Chr17:48786165-48792385 (-)
C57BL/6NJ MGP_C57BL6NJ_G0024260
protein coding gene Chr17:50942362-50948584 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0021709
protein coding gene Chr17:44398010-44404232 (-)
CAST/EiJ MGP_CASTEiJ_G0023061
protein coding gene Chr17:48897543-48903796 (-)
CBA/J MGP_CBAJ_G0023556
protein coding gene Chr17:52788470-52794825 (-)
DBA/2J MGP_DBA2J_G0023684
protein coding gene Chr17:46396492-46402711 (-)
FVB/NJ MGP_FVBNJ_G0023650
protein coding gene Chr17:46054398-46060614 (-)
LP/J MGP_LPJ_G0023764
protein coding gene Chr17:49552681-49558935 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0023678
protein coding gene Chr17:52263919-52270141 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0024305
protein coding gene Chr17:48412512-48418719 (-)
PWK/PhJ MGP_PWKPhJ_G0022806
protein coding gene Chr17:45770834-45777168 (-)
SPRET/EiJ MGP_SPRETEiJ_G0022621
protein coding gene Chr17:45298535-45304778 (-)
WSB/EiJ MGP_WSBEiJ_G0023126
protein coding gene Chr17:48992060-49001638 (-)



Homology
more
  • Human Ortholog
    PRICKLE4, prickle planar cell polarity protein 4
  • Vertebrate Orthologs
    5
  • Human Ortholog
    PRICKLE4, prickle planar cell polarity protein 4
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C6orf49, OBTP, OEBT, TOMM6
  • Links
    NCBI Gene ID: 29964
    neXtProt AC: NX_Q2TBC4
    UniProt: Q2TBC4

  • Chr Location
    6p21.1; chr6:41780762-41787372 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000096549 Ensembl Gene Model | MGI Sequence Detail 6220 C57BL/6J ±  kb
transcript ENSMUST00000113300 Ensembl | MGI Sequence Detail 1110 Not Applicable  
polypeptide ENSMUSP00000108925 Ensembl | MGI Sequence Detail 369 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 1
References
more
  • Summaries
    All 13
    Phenotypes 2
  • Earliest
    J:162220 Magdaleno S, et al., BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. PLoS Biol. 2006 Apr;4(4):e86
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory