Fam186a Gene Detail

Summary

• Symbol
  Fam186a
• Name
  family with sequence similarity 186, member A
• Synonyms
  1700030F18Rik, LOC380973

• Feature Type
  protein coding gene
• IDs
  MGI:2685766
  NCBI Gene: 72277

Location & Maps

• Sequence Map
  Chr15:99918348-99967075 bp, - strand
• From VEGA annotation of GRCm38
  

  Mouse Genome Browser
  
  

• Download
  Sequence
    48728 bp   ±  kb flank
  
  
• Genome Browsers
  VEGA | Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, 56.13 cM, cytoband F3
• Mapping Data
  3 experiments

Homology

• Human Ortholog
  FAM186A, family with sequence similarity 186 member A

• Human Ortholog
  FAM186A, family with sequence similarity 186 member A
  Orthology source: HGNC
• Links
  HGNC:26980

  NCBI Gene ID: 121006

  neXtProt AC: NX_A6NE01

  UniProt: A6NE01

  
  
• Chr Location
  12q13.12; chr12:50326854-50396633 (-)  GRCh38.p7

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• HCOP
  human homology predictions: FAM186A
• Gene Tree
  Fam186a
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  22 phenotype references
  

• All Mutations and Alleles
  22
• Chemically induced (other)
  1
• Gene trapped
  19
• Radiation induced
  2
• Genomic Mutations
  3 involving Fam186a
• Incidental Mutations
  APF
• Find Mice (IMSR)
  22 strains or lines available

Gene Ontology
(GO)
Classifications

• External Resources
  FuncBase

Expression

• cDNA Data
  6

• Other Mouse Links
  Allen Institute
  GEO
  Expression Atlas

Interactions

• Fam186a interacts with 17 markers (Mir30a, Mir30b, Mir30c-1, ...) View All

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  3
• UniProt
  3
• CCDS
  CCDS37207.1

• VEGA
  OTTMUSG00000042398 (Evidence)
• Ensembl
  ENSMUSG00000045350 (Evidence)
• NCBI Gene
  72277

Representative Sequences			Length	Strain/Species
genomic	OTTMUSG00000042398	VEGA Gene Model | MGI Sequence Detail	48728	C57BL/6J
transcript	OTTMUST00000111755	VEGA | MGI Sequence Detail	9334	Not Applicable
polypeptide	OTTMUSP00000062633	VEGA | MGI Sequence Detail	3035	Not Applicable

Polymorphisms

• SNPs within 2kb
  136 from dbSNP Build 142

Protein
Information

• UniProt
  3 Sequences

Molecular
Reagents

• All nucleic 6

  cDNA 6

  
  

  Microarray probesets 4

Other
Accession IDs

MGI:1919527

References

• Summaries
  All 42

  Diseases 1

  Phenotypes 22
• Earliest
  J:13437 Bangham JW, Hairy ears, Eh. Mouse News Lett. 1965;33:68
• Latest
  J:233611 Hirata A, et al., Homeobox family Hoxc localization during murine palate formation. Congenit Anom (Kyoto). 2016 Jul;56(4):172-9