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Tmem171 Gene Detail
Summary
  • Symbol
    Tmem171
  • Name
    transmembrane protein 171
  • Synonyms
    LOC380863
  • Feature Type
    protein coding gene
  • IDs
    MGI:2685751
    NCBI Gene: 380863
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:98686235-98694834 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 13, 52.13 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    89 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2685751
protein coding gene Chr13:98686235-98695654 (-)
129S1/SvImJ MGP_129S1SvImJ_G0020869
protein coding gene Chr13:100421695-100430294 (-)
A/J MGP_AJ_G0020823
protein coding gene Chr13:96595316-96603934 (-)
AKR/J MGP_AKRJ_G0020797
protein coding gene Chr13:99539641-99548239 (-)
BALB/cJ MGP_BALBcJ_G0020821
protein coding gene Chr13:97301264-97309870 (-)
C3H/HeJ MGP_C3HHeJ_G0020612
protein coding gene Chr13:99286008-99294612 (-)
C57BL/6NJ MGP_C57BL6NJ_G0021255
protein coding gene Chr13:103431789-103440388 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0018824
protein coding gene Chr13:92326947-92334536 (-)
CAST/EiJ MGP_CASTEiJ_G0020130
protein coding gene Chr13:98644679-98653291 (-)
CBA/J MGP_CBAJ_G0020572
protein coding gene Chr13:107540337-107551326 (-)
DBA/2J MGP_DBA2J_G0020697
protein coding gene Chr13:96359308-96367919 (-)
FVB/NJ MGP_FVBNJ_G0020678
protein coding gene Chr13:95108544-95117140 (-)
LP/J MGP_LPJ_G0020772
protein coding gene Chr13:100528203-100536802 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0020706
protein coding gene Chr13:107869170-107877773 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0021296
protein coding gene Chr13:98988608-98997219 (-)
PWK/PhJ MGP_PWKPhJ_G0019883
protein coding gene Chr13:95165699-95174364 (-)
SPRET/EiJ MGP_SPRETEiJ_G0019706
protein coding gene Chr13:95273884-95282526 (-)
WSB/EiJ MGP_WSBEiJ_G0020188
protein coding gene Chr13:99434904-99444700 (-)



Homology
more
  • Human Ortholog
    TMEM171, transmembrane protein 171
  • Vertebrate Orthologs
    9
  • Human Ortholog
    TMEM171, transmembrane protein 171
    Orthology source: HomoloGene, HGNC
  • Synonyms
    PRP2
  • Links
    NCBI Gene ID: 134285
    neXtProt AC: NX_Q8WVE6
    UniProt: Q8WVE6

  • Chr Location
    5q13.2; chr5:73120561-73131817 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000052485 Ensembl Gene Model | MGI Sequence Detail 8600 C57BL/6J ±  kb
transcript ENSMUST00000064347 Ensembl | MGI Sequence Detail 1161 Not Applicable  
polypeptide ENSMUSP00000070369 Ensembl | MGI Sequence Detail 322 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 11
    cDNA 11

    Microarray probesets 3
References
more
  • Summaries
    All 21
    Gene Ontology 1
    Phenotypes 3
  • Earliest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
11/26/2019
MGI 6.14
The Jackson Laboratory