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Tmem171 Gene Detail
Summary
  • Symbol
    Tmem171
  • Name
    transmembrane protein 171
  • Synonyms
    LOC380863
  • Feature Type
    protein coding gene
  • IDs
    MGI:2685751
    NCBI Gene: 380863
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:98686235-98694834 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 13, 52.13 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    89 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2685751
 protein coding gene Chr13:98686235-98695654 (-)
129S1/SvImJ MGP_129S1SvImJ_G0020869
 protein coding gene Chr13:100421695-100430294 (-)
A/J MGP_AJ_G0020823
 protein coding gene Chr13:96595316-96603934 (-)
AKR/J MGP_AKRJ_G0020797
 protein coding gene Chr13:99539641-99548239 (-)
BALB/cJ MGP_BALBcJ_G0020821
 protein coding gene Chr13:97301264-97309870 (-)
C3H/HeJ MGP_C3HHeJ_G0020612
 protein coding gene Chr13:99286008-99294612 (-)
C57BL/6NJ MGP_C57BL6NJ_G0021255
 protein coding gene Chr13:103431789-103440388 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0018824
 protein coding gene Chr13:92326947-92334536 (-)
CAST/EiJ MGP_CASTEiJ_G0020130
 protein coding gene Chr13:98644679-98653291 (-)
CBA/J MGP_CBAJ_G0020572
 protein coding gene Chr13:107540337-107551326 (-)
DBA/2J MGP_DBA2J_G0020697
 protein coding gene Chr13:96359308-96367919 (-)
FVB/NJ MGP_FVBNJ_G0020678
 protein coding gene Chr13:95108544-95117140 (-)
LP/J MGP_LPJ_G0020772
 protein coding gene Chr13:100528203-100536802 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0020706
 protein coding gene Chr13:107869170-107877773 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0021296
 protein coding gene Chr13:98988608-98997219 (-)
PWK/PhJ MGP_PWKPhJ_G0019883
 protein coding gene Chr13:95165699-95174364 (-)
SPRET/EiJ MGP_SPRETEiJ_G0019706
 protein coding gene Chr13:95273884-95282526 (-)
WSB/EiJ MGP_WSBEiJ_G0020188
 protein coding gene Chr13:99434904-99444700 (-)



Homology
more
  • Human Ortholog
    TMEM171, transmembrane protein 171
  • Vertebrate Orthologs
    9
  • Human Ortholog
    TMEM171, transmembrane protein 171
    Orthology source: HomoloGene, HGNC
  • Synonyms
    PRP2
  • Links
    NCBI Gene ID: 134285
    neXtProt AC: NX_Q8WVE6
    UniProt: Q8WVE6

  • Chr Location
    5q13.2; chr5:73120561-73131817 (+)  GRCh38.p7
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    1
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    631
  • cDNA Data
    11
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000052485 Ensembl Gene Model | MGI Sequence Detail 8600 C57BL/6J ±  kb
transcript ENSMUST00000064347 Ensembl | MGI Sequence Detail 1161 Not Applicable  
polypeptide ENSMUSP00000070369 Ensembl | MGI Sequence Detail 322 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 11
    cDNA 11

    Microarray probesets 3
References
more
  • Summaries
    All 21
    Gene Ontology 1
    Phenotypes 3
  • Earliest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/13/2021
MGI 6.16 		The Jackson Laboratory