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Pitpnm3 Gene Detail
Summary
  • Symbol
    Pitpnm3
  • Name
    PITPNM family member 3
  • Synonyms
    A330068P14Rik, Ackr6
  • Feature Type
    protein coding gene
  • IDs
    MGI:2685726
    NCBI Gene: 327958
Location & Maps
more
  • Sequence Map
    Chr11:72047528-72135778 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      88251 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 43.82 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    PITPNM3, PITPNM family member 3
  • Vertebrate Orthologs
    11
  • Human Ortholog
    PITPNM3, PITPNM family member 3
    Orthology source: HomoloGene
  • Synonyms
    ACKR6, CORD5, NIR1, RDGBA3
  • Links
    NCBI Gene ID: 83394
    neXtProt AC: NX_Q9BZ71

  • Chr Location
    17p13; chr17:6450344-6556557 (-)  GRCh38.p2

Human Diseases
more
  • Diseases
    1 with human PITPNM3 associations

Human Disease Mouse Models
       Cone-Rod Dystrophy 5; CORD5   OMIM: 600977
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    10 phenotype references
  • All Mutations and Alleles
    5
  • Chemically induced (other)
    1
  • Gene trapped
    1
  • Targeted
    3
  • Genomic Mutations
    2 involving Pitpnm3
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000006099 VEGA Gene Model | MGI Sequence Detail 88251 C57BL/6J ±  kb
transcript OTTMUST00000013780 VEGA | MGI Sequence Detail 6555 Not Applicable  
polypeptide OTTMUSP00000006387 VEGA | MGI Sequence Detail 974 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    803 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 31
    Genomic 1
    cDNA 30

    Microarray probesets 6
Other
Accession IDs
less
MGI:2144294
References
more
  • Summaries
    All 25
    Developmental Gene Expression 1
    Gene Ontology 2
    Phenotypes 10
  • Earliest
    J:93300 Blackshaw S, et al., Genomic analysis of mouse retinal development. PLoS Biol. 2004 Oct;2(9):E247
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/19/2016
MGI 6.04
The Jackson Laboratory