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Pitpnm3
Gene Detail
 Symbol
Name
ID
Pitpnm3
PITPNM family member 3
MGI:2685726
Synonyms A330068P14Rik, Ackr6
Feature Type protein coding gene
Genetic Map
Chromosome 11
43.82 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr11:72047528-72135778 bp, - strand
From VEGA annotation of GRCm38

  88251 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:66271  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 2 zebrafish

Gene Tree: Pitpnm3

Human
homologs
Human Homolog PITPNM3, PITPNM family member 3
NCBI Gene ID 83394
neXtProt AC  NX_Q9BZ71
Human Synonyms  ACKR6, CORD5, NIR1, RDGBA3
Human Chr (Location)  17p13; chr17:6451263-6556557 (-)  GRCh38
Disease Associations  (1) Diseases Associated with Human PITPNM3
Mutations,
alleles, and
phenotypes
All mutations/alleles(3) : Gene trapped(1) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Pitpnm3 interacts with 371 markers (Mir1a-1, Mir1a-2, Mir7-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (6 annotations)
Process transport
Component intracellular, membrane
Function lipid binding, metal ion binding
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (11)    Tissues (8)    Images (20)
Theiler Stages: 22, 24, 26, 27, 28
Assay TypeResults
RNA in situ 11
cDNA source data(29)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(31) Genomic(1) cDNA(30)
Microarray probesets(6)
Other database
links
VEGA Gene ModelOTTMUSG00000006099 (Evidence)
Ensembl Gene ModelENSMUSG00000040543 (Evidence)
Entrez Gene327958 (Evidence)
UniGene351793
DFCITC1610265, TC1633304, TC1645096
DoTSDT.110510423, DT.40179559, DT.91413121
NIA Mouse Gene IndexU033021
Consensus CDS ProjectCCDS24978.1, CCDS36213.1
International Mouse Knockout Project StatusPitpnm3
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000006099 VEGA Gene Model | MGI Sequence Detail 88251 C57BL/6J ±  kb
transcript OTTMUST00000013780 VEGA | MGI Sequence Detail 6555 Not Applicable 
polypeptide OTTMUSP00000006387 VEGA | MGI Sequence Detail 974 Not Applicable 

For the selected sequences
All sequences(53) RefSeq(13) UniProt(2)
Polymorphisms SNPs within 2kb(816 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR004177 DDHD
InterPro IPR023214 HAD-like domain
InterPro IPR013209 LNS2, Lipin/Ned1/Smp2
InterPro IPR001666 Phosphatidylinositol transfer protein
Protein Ontology PR:000012758 membrane-associated phosphatidylinositol transfer protein 3
References (Earliest) J:93300 Blackshaw S, et al., Genomic analysis of mouse retinal development. PLoS Biol. 2004 Oct;2(9):E247
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(29)
Other
accession IDs
MGI:2144294

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/26/2014
MGI 5.19
The Jackson Laboratory