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Ccnjl Gene Detail
Summary
  • Symbol
    Ccnjl
  • Name
    cyclin J-like
  • Synonyms
    LOC380694
  • Feature Type
    protein coding gene
  • IDs
    MGI:2685723
    NCBI Gene: 380694
  • Alliance
    genome feature page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:43419611-43477824 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 25.78 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1811 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2685723
 protein coding gene Chr11:43419576-43477826 (+)
129S1/SvImJ ENSMUSG00200007081
 protein coding gene Chr11:40487366-40545645 (+)
A/J ENSMUSG00195006963
 protein coding gene Chr11:40439673-40497964 (+)
AKR/J ENSMUSG00220003159
 protein coding gene Chr11:40643551-40701743 (+)
BALB/cJ ENSMUSG00180001748
 protein coding gene Chr11:40431783-40490039 (+)
C3H/HeJ ENSMUSG00175003702
 protein coding gene Chr11:40433284-40491555 (+)
C57BL/6NJ ENSMUSG00215007923
 protein coding gene Chr11:40358960-40417193 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0016224
 protein coding gene Chr11:38745990-38805207 (+)
CAST/EiJ ENSTCUG00005012897
 protein coding gene Chr11:40168396-40227184 (+)
CBA/J ENSMUSG00210006515
 protein coding gene Chr11:40322515-40380786 (+)
DBA/2J ENSMUSG00185010129
 protein coding gene Chr11:40514916-40573124 (+)
FVB/NJ ENSMUSG00205010988
 protein coding gene Chr11:40447037-40505085 (+)
JF1/MsJ ENSUMUG00000018908
 protein coding gene Chr11:40725906-40784713 (+)
LP/J ENSMUSG00230028816
 protein coding gene Chr11:41651704-41709964 (+)
NOD/ShiLtJ ENSMUSG00190007303
 protein coding gene Chr11:40545060-40603335 (+)
NZO/HlLtJ ENSMUSG00225034837
 protein coding gene Chr11:43609038-43667238 (+)
PWK/PhJ ENSLUMG00010007141
 protein coding gene Chr11:40317344-40376421 (+)
SPRET/EiJ ENSMSPG00010002188
 protein coding gene Chr11:40905705-40962951 (+)
WSB/EiJ ENSIUOG00005002038
 protein coding gene Chr11:40308953-40367173 (+)



Homology
more
  • Human Ortholog
    CCNJL, cyclin J like
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CCNJL, cyclin J like
  • Links
    NCBI Gene ID: 79616
    UniProt: Q8IV13

  • Chr Location
    5q33.3; chr5:160249083-160345396 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
  • All Mutations and Alleles
    5
  • Chemically induced (other)
    1
  • Endonuclease-mediated
    1
  • Gene trapped
    2
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Ccnjl
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
    13 strains or lines available
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    6
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    599
  • Tissues
    1
  • cDNA Data
    16
  • Literature Summary
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000044707 Ensembl Gene Model | MGI Sequence Detail 58214 C57BL/6J ±  kb
transcript ENSMUST00000050574 Ensembl | MGI Sequence Detail 2672 Not Applicable  
polypeptide ENSMUSP00000058111 Ensembl | MGI Sequence Detail 387 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 17
    cDNA 16
    Primer pair 1

    Microarray probesets 4
References
more
  • Summaries
    All 28
    Developmental Gene Expression 2
    Gene Ontology 1
    Phenotypes 7
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:344223 Zhang W, et al., NLRP14 deficiency causes female infertility with oocyte maturation defects and early embryonic arrest by impairing cytoplasmic UHRF1 abundance. Cell Rep. 2023 Dec 26;42(12):113531
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory