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Acss3 Gene Detail
Summary
  • Symbol
    Acss3
  • Name
    acyl-CoA synthetase short-chain family member 3
  • Synonyms
    8430416H19Rik, LOC380660
  • Feature Type
    protein coding gene
  • IDs
    MGI:2685720
    NCBI Gene: 380660
Location & Maps
more
  • Sequence Map
    Chr10:106965082-107123668 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      158587 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 10, 55.66 cM
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    ACSS3, acyl-CoA synthetase short-chain family member 3
  • Vertebrate Orthologs
    9
  • Human Ortholog
    ACSS3, acyl-CoA synthetase short-chain family member 3
    Orthology source: HGNC, HomoloGene
  • Links
    NCBI Gene ID: 79611
    neXtProt AC: NX_Q9H6R3

  • Chr Location
    12q21.31; chr12:81078018-81257795 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    8 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    1
  • Targeted
    2
  • Genomic Mutations
    1 involving Acss3
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000023051 VEGA Gene Model | MGI Sequence Detail 158587 C57BL/6J ±  kb
transcript OTTMUST00000055561 VEGA | MGI Sequence Detail 2494 Not Applicable  
polypeptide OTTMUSP00000026617 VEGA | MGI Sequence Detail 497 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    1510 from dbSNP Build 142
Protein
Information
less
  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000003673 acyl-CoA synthetase short-chain family member 3, mitochondrial
  • EC
  • InterPro Domains
    IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain
    IPR020845 AMP-binding, conserved site
    IPR025110 AMP-binding enzyme C-terminal domain
    IPR000873 AMP-dependent synthetase/ligase
Molecular
Reagents
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  • All nucleic 5
    cDNA 4
    Primer pair 1

    Microarray probesets 1
References
more
  • Summaries
    All 25
    Developmental Gene Expression 2
    Gene Ontology 4
    Phenotypes 8
  • Earliest
    J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/19/2016
MGI 6.04
The Jackson Laboratory