Gm867 Gene Detail

Summary

• Symbol
  Gm867
• Name
  predicted gene 867
• Synonyms
  LOC327769, LOC333670

• Feature Type
  protein coding gene
• IDs
  MGI:2685713
  NCBI Gene: 333670
• Alliance
  gene page
• Transcription Start Sites
  7 TSS

Location &
Maps

• Sequence Map
  Chr10:75773557-75776506 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 38.62 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  22 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_2685713	protein coding gene	Chr10:75773553-75776508 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0002866	antisense lncRNA gene	Chr10:76140076-76143030 (-)
A/J	MGP_AJ_G0002843	antisense lncRNA gene	Chr10:73521256-73524215 (-)
AKR/J	MGP_AKRJ_G0002823	antisense lncRNA gene	Chr10:75495721-75498654 (-)
BALB/cJ	MGP_BALBcJ_G0002830	antisense lncRNA gene	Chr10:73718937-73721892 (-)
C3H/HeJ	MGP_C3HHeJ_G0002787	antisense lncRNA gene	Chr10:75543177-75547203 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0002973	antisense lncRNA gene	Chr10:78832588-78835554 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002516	antisense lncRNA gene	Chr10:69972560-69975305 (-)
CAST/EiJ	MGP_CASTEiJ_G0002759	antisense lncRNA gene	Chr10:75859032-75863827 (-)
CBA/J	MGP_CBAJ_G0002782	antisense lncRNA gene	Chr10:81903881-81906812 (-)
DBA/2J	MGP_DBA2J_G0002789	antisense lncRNA gene	Chr10:72820923-72823875 (-)
FVB/NJ	MGP_FVBNJ_G0002809	antisense lncRNA gene	Chr10:71975734-71990497 (-)
LP/J	MGP_LPJ_G0002865	antisense lncRNA gene	Chr10:76641029-76643980 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0002799	antisense lncRNA gene	Chr10:83996757-83999583 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0002976	antisense lncRNA gene	Chr10:75530813-75533759 (-)
PWK/PhJ	MGP_PWKPhJ_G0002717	antisense lncRNA gene	Chr10:72649445-72652476 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0002667	antisense lncRNA gene	Chr10:74782547-74785470 (-)
WSB/EiJ	MGP_WSBEiJ_G0002788	antisense lncRNA gene	Chr10:75512682-75516453 (-)

Homology

• Human Ortholog
  C22orf15, chromosome 22 open reading frame 15

• Vertebrate Orthologs
  2

Vertebrate Orthology Source

Alliance of Genome Resources

• Human Ortholog
  C22orf15, chromosome 22 open reading frame 15
  
• Synonyms
  N27C7-3
• Links
  HGNC:15558

  NCBI Gene ID: 150248

  neXtProt AC: NX_Q8WYQ4

  UniProt: Q8WYQ4

  
  
• Chr Location
  22q11.23; chr22:23762522-23765863 (+)  GRCh38.p7

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• Alliance of Genome Resources
  Gm867 stringent orthology
  1 human;1 mouse;1 rat
  
• HCOP
  vertebrate homology predictions: C22orf15
• Gene Tree
  Gm867
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  9 phenotype references
  

• All Mutations and Alleles
  6
• Chemically induced (other)
  1
• Gene trapped
  5
• Genomic Mutations
  1 involving Gm867
• Find Mice (IMSR)
  8 strains or lines available

Expression

• Assay Results
  672
• cDNA Data
  2
• Literature Summary
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Interactions

• Gm867 interacts with 97 markers (Mir18, Mir18b, Mir26b, ...) View All

Sequences &
Gene Models

• All Sequences
  61
• RefSeq
  32
• UniProt
  2
• CCDS
  CCDS88025.1

• Ensembl
  ENSMUSG00000050157 (Evidence)
• NCBI Gene
  333670

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000050157	Ensembl Gene Model | MGI Sequence Detail	2950	C57BL/6J
transcript	ENSMUST00000219979	Ensembl | MGI Sequence Detail	714	Not Applicable
polypeptide	ENSMUSP00000151812	Ensembl | MGI Sequence Detail	151	Not Applicable

Protein
Information

• UniProt
  2 Sequences
• InterPro Domains
  IPR039471 Uncharacterized protein CXorf65-like

Molecular
Reagents

• All nucleic 2

  cDNA 2

  
  

  Microarray probesets 2

Other
Accession IDs

MGI:2685582

References

• Summaries
  All 22

  Developmental Gene Expression 1

  Phenotypes 9
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:158418 Endoh-Yamagami S, et al., A mutation in the pericentrin gene causes abnormal interneuron migration to the olfactory bulb in mice. Dev Biol. 2010 Apr 1;340(1):41-53

TSS for Gm867:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr98160	Chr10:75776467-75776517 (-)	14 bp
Tssr98159	Chr10:75776437-75776457 (-)	59 bp
Tssr98158	Chr10:75776400-75776412 (-)	100 bp
Tssr98157	Chr10:75775874-75775881 (-)	628 bp
Tssr98156	Chr10:75775838-75775857 (-)	658 bp
Tssr98155	Chr10:75775798-75775836 (-)	689 bp
Tssr98154	Chr10:75774222-75774227 (-)	2,281 bp