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A330043C09Rik Gene Detail
Summary
  • Symbol
    A330043C09Rik
  • Name
    RIKEN cDNA A330043C09 gene
  • Synonyms
    LOC329430
  • Feature Type
    lncRNA gene
  • IDs
    MGI:2685671
    NCBI Gene: 329430
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr2:75147118-75177658 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 44.45 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    253 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2685671
lncRNA gene Chr2:75147118-75177658 (-)
129S1/SvImJ MGP_129S1SvImJ_G0005946
lincRNA gene Chr2:75498105-75528650 (-)
A/J MGP_AJ_G0005939
lincRNA gene Chr2:72533626-72564172 (-)
AKR/J MGP_AKRJ_G0005914
lincRNA gene Chr2:74498751-74529340 (-)
BALB/cJ MGP_BALBcJ_G0005917
lincRNA gene Chr2:72722415-72752950 (-)
C3H/HeJ MGP_C3HHeJ_G0005865
lincRNA gene Chr2:74713217-74743721 (-)
C57BL/6NJ MGP_C57BL6NJ_G0006078
lincRNA gene Chr2:77744202-77774721 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0005411
lincRNA gene Chr2:69965562-69996276 (-)
CAST/EiJ MGP_CASTEiJ_G0005801
lincRNA gene Chr2:75022325-75053710 (-)
CBA/J MGP_CBAJ_G0005850
lincRNA gene Chr2:80581159-80611663 (-)
DBA/2J MGP_DBA2J_G0005871
lincRNA gene Chr2:72141298-72172104 (-)
FVB/NJ MGP_FVBNJ_G0005896
lincRNA gene Chr2:71526761-71557284 (-)
LP/J MGP_LPJ_G0005950
lincRNA gene Chr2:75352561-75383106 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0005884
lincRNA gene Chr2:82498249-82529515 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0006075
lincRNA gene Chr2:74629094-74659631 (-)
PWK/PhJ MGP_PWKPhJ_G0005750
lincRNA gene Chr2:72080088-72111616 (-)
SPRET/EiJ MGP_SPRETEiJ_G0005661
lincRNA gene Chr2:74852881-74886345 (-)
WSB/EiJ MGP_WSBEiJ_G0005854
lincRNA gene Chr2:75079936-75110453 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000086044 Ensembl Gene Model | MGI Sequence Detail 30541 C57BL/6J ±  kb
transcript ENSMUST00000139823 Ensembl | MGI Sequence Detail 1009 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    Genomic 2
    cDNA 1
References
more
  • Summaries
    All 14
    Phenotypes 5
  • Earliest
    J:100298 Spitz F, et al., Inversion-induced disruption of the Hoxd cluster leads to the partition of regulatory landscapes. Nat Genet. 2005 Aug;37(8):889-93
  • Latest
    J:269738 Guerreiro I, et al., Reorganisation of Hoxd regulatory landscapes during the evolution of a snake-like body plan. Elife. 2016 Aug 1;5

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
02/11/2020
MGI 6.14
The Jackson Laboratory