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Cfap77 Gene Detail
Summary
  • Symbol
    Cfap77
  • Name
    cilia and flagella associated protein 77
  • Synonyms
    1700101E01Rik, LOC329375
  • Feature Type
    protein coding gene
  • IDs
    MGI:2685669
    NCBI Gene: 329375
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:28955481-29055066 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 19.38 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    584 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2685669
protein coding gene Chr2:28926949-29055066 (-)
129S1/SvImJ MGP_129S1SvImJ_G0025535
protein coding gene Chr2:27014663-27152597 (-)
A/J MGP_AJ_G0025512
protein coding gene Chr2:25984193-26112668 (-)
AKR/J MGP_AKRJ_G0025482
protein coding gene Chr2:26842977-26977324 (-)
BALB/cJ MGP_BALBcJ_G0025508
protein coding gene Chr2:26106057-26235799 (-)
C3H/HeJ MGP_C3HHeJ_G0025269
protein coding gene Chr2:26765458-26902685 (-)
C57BL/6NJ MGP_C57BL6NJ_G0025952
protein coding gene Chr2:27908619-28050109 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0023362
protein coding gene Chr2:24799690-24926621 (-)
CAST/EiJ MGP_CASTEiJ_G0024732
protein coding gene Chr2:26677191-26809245 (-)
CBA/J MGP_CBAJ_G0025247
protein coding gene Chr2:28857293-29000855 (-)
DBA/2J MGP_DBA2J_G0025380
protein coding gene Chr2:25793028-25920432 (-)
FVB/NJ MGP_FVBNJ_G0025342
protein coding gene Chr2:25586904-25716209 (-)
LP/J MGP_LPJ_G0025466
protein coding gene Chr2:26957012-27094443 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0025373
protein coding gene Chr2:28864085-29006938 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0026011
protein coding gene Chr2:26759039-26894452 (-)
PWK/PhJ MGP_PWKPhJ_G0024479
protein coding gene Chr2:25604877-25735889 (-)
SPRET/EiJ MGP_SPRETEiJ_G0024279
protein coding gene Chr2:26891067-27023773 (-)
WSB/EiJ MGP_WSBEiJ_G0024801
protein coding gene Chr2:26894687-27026180 (-)



Homology
more
  • Human Ortholog
    CFAP77, cilia and flagella associated protein 77
  • Vertebrate Orthologs
    10
  • Human Ortholog
    CFAP77, cilia and flagella associated protein 77
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C9orf171
  • Links
    NCBI Gene ID: 389799
    neXtProt AC: NX_Q6ZQR2
    UniProt: Q6ZQR2

  • Chr Location
    9q34.13; chr9:132410043-132573319 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 45813
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: CFAP77
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 329375 NCBI Gene Model | MGI Sequence Detail 99586 C57BL/6J ±  kb
transcript NM_001166705 RefSeq | MGI Sequence Detail 931 C57BL/6  
polypeptide NP_001160177 RefSeq | MGI Sequence Detail 271 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
  • InterPro Domains
    IPR029147 Cilia- and flagella-associated protein 77
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6

    Microarray probesets 1
References
more
  • Summaries
    All 16
    Phenotypes 2
  • Earliest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
07/29/2020
MGI 6.15
The Jackson Laboratory