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Rbm44
Gene Detail
 Symbol
Name
ID
Rbm44
RNA binding motif protein 44
MGI:2685663
Synonyms LOC329207
Feature Type protein coding gene
Genetic Map
Chromosome 1
46.08 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr1:91145089-91170795 bp, + strand
From VEGA annotation of GRCm38

  25707 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:66636  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog

Gene Tree: Rbm44

Human
homologs
Human Homolog RBM44, RNA binding motif protein 44
NCBI Gene ID 375316
neXtProt AC  NX_Q6ZP01
Human Chr (Location)  2q37.3; chr2:237798279-237842808 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(5) : Gene trapped(1) Targeted(4)
Incidental mutations (data from Mutagenetix , APF )
 
Male mice homozygous or heterozygous for a knock-out allele exhibit enhanced fertility with increased litter size.
 
Interactions
Rbm44 interacts with 169 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (8 annotations)
Process biological_process
Component cytoplasm, intercellular bridge
Function nucleic acid binding, nucleotide binding, ...
External Resources: FuncBase
Expression
cDNA source data(6)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(6) cDNA(6)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000048485 (Evidence)
Ensembl Gene ModelENSMUSG00000070732 (Evidence)
Entrez Gene329207 (Evidence)
UniGene295940
DFCITC1589488
DoTSDT.94165105
NIA Mouse Gene IndexU052327
Consensus CDS ProjectCCDS15157.1
International Mouse Knockout Project StatusRbm44
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000048485 VEGA Gene Model | MGI Sequence Detail 25707 C57BL/6J ±  kb
transcript OTTMUST00000124267 VEGA | MGI Sequence Detail 3851 Not Applicable 
polypeptide OTTMUSP00000067649 VEGA | MGI Sequence Detail 1013 Not Applicable 

For the selected sequences
All sequences(27) RefSeq(8) UniProt(2)
Polymorphisms SNPs within 2kb(299 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR012677 Nucleotide-binding, alpha-beta plait
InterPro IPR000504 RNA recognition motif domain
Protein Ontology PR:000013802 RNA-binding protein 44
References (Earliest) J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(29)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory