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Zfp853 Gene Detail
Summary
  • Symbol
    Zfp853
  • Name
    zinc finger protein 853
  • Synonyms
    LOC330230
  • Feature Type
    protein coding gene
  • IDs
    MGI:2685638
    NCBI Gene: 330230
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr5:143272793-143279378 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 82.06 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    8 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2685638
protein coding gene Chr5:143269283-143279757 (-)
129S1/SvImJ MGP_129S1SvImJ_G0030327
protein coding gene Chr5:148609228-148613825 (-)
A/J MGP_AJ_G0030296
protein coding gene Chr5:142233073-142237670 (-)
AKR/J MGP_AKRJ_G0030228
protein coding gene Chr5:146692389-146696990 (-)
BALB/cJ MGP_BALBcJ_G0030313
protein coding gene Chr5:143484384-143488981 (-)
C3H/HeJ MGP_C3HHeJ_G0030024
protein coding gene Chr5:147503517-147508114 (-)
C57BL/6NJ MGP_C57BL6NJ_G0030758
protein coding gene Chr5:154040957-154045558 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0027976
protein coding gene Chr5:136011941-136017227 (-)
CAST/EiJ MGP_CASTEiJ_G0029429
protein coding gene Chr5:146994800-146999454 (-)
CBA/J MGP_CBAJ_G0029994
protein coding gene Chr5:160391718-160396319 (-)
DBA/2J MGP_DBA2J_G0030144
protein coding gene Chr5:141999790-142004387 (-)
FVB/NJ MGP_FVBNJ_G0030099
protein coding gene Chr5:141209132-141213729 (-)
LP/J MGP_LPJ_G0030230
protein coding gene Chr5:149215390-149219985 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0030130
protein coding gene Chr5:162791355-162795952 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0030798
protein coding gene Chr5:146537686-146542283 (-)
PWK/PhJ MGP_PWKPhJ_G0029144
protein coding gene Chr5:141084709-141089480 (-)
SPRET/EiJ MGP_SPRETEiJ_G0028980
protein coding gene Chr5:144275239-144279798 (-)
WSB/EiJ MGP_WSBEiJ_G0029502
protein coding gene Chr5:147327791-147332394 (-)



Homology
more
  • Human Ortholog
    ZNF316, zinc finger protein 316
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ZNF316, zinc finger protein 316
  • Synonyms
    MZF-3
  • Links
    NCBI Gene ID: 100131017
    neXtProt AC: NX_A6NFI3
    UniProt: A6NFI3

  • Chr Location
    7p22.1; chr7:6637322-6658279 (+)  GRCh38.p7

  • Human Ortholog
    ZNF853, zinc finger protein 853
  • Links
    NCBI Gene ID: 54753
    neXtProt AC: NX_P0CG23
    UniProt: P0CG23

  • Chr Location
    7p22.1; chr7:6615621-6624290 (+)  GRCh38.p7

Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000093910 Ensembl Gene Model | MGI Sequence Detail 6586 C57BL/6J ±  kb
transcript ENSMUST00000212355 Ensembl | MGI Sequence Detail 2871 Not Applicable  
polypeptide ENSMUSP00000148683 Ensembl | MGI Sequence Detail 733 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
  • InterPro Domains
    IPR036236 Zinc finger C2H2 superfamily
    IPR013087 Zinc finger C2H2-type
References
more
  • Summaries
    All 8
    Gene Ontology 1
  • Earliest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/12/2021
MGI 6.17
The Jackson Laboratory