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Ccdc135
Gene Detail
 Symbol
Name
ID
Ccdc135
coiled-coil domain containing 135
MGI:2685616
Synonyms LOC330830, SRG-L
Feature Type protein coding gene
Genetic Map
Chromosome 8
47.12 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr8:95055103-95078141 bp, + strand
From NCBI annotation of GRCm38

  23039 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:12996  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Ccdc135

Human
homologs
Human Homolog DRC7, dynein regulatory complex subunit 7
NCBI Gene ID 84229
neXtProt AC  NX_Q8IY82
Human Synonyms  C16orf50, CCDC135, CFAP50, FAP50
Human Chr (Location)  16q21; chr16:57694801-57731455 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(2) : Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Ccdc135 interacts with 49 markers (Mir22, Mir92-1, Mir98, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (7 annotations)
Process cell differentiation, spermatogenesis
Component cell projection, cilium, ...
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (33)    Tissues (3)    Images (18)
Theiler Stages: 23
Assay TypeResults
RNA in situ 33
cDNA source data(6)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(7) cDNA(6) Other(1)
Microarray probesets(1)
Other database
links
Ensembl Gene ModelENSMUSG00000031786 (Evidence)
Entrez Gene330830 (Evidence)
UniGene277112
DFCITC1588418, TC1624225
DoTSDT.101301009, DT.91561766
NIA Mouse Gene IndexU009682
Consensus CDS ProjectCCDS40444.1
International Mouse Knockout Project StatusCcdc135
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 330830 NCBI Gene Model | MGI Sequence Detail 23039 C57BL/6J ±  kb
transcript NM_001042715 RefSeq | MGI Sequence Detail 2832 Not Specified 
polypeptide Q6V3W6 UniProt | EBI | MGI Sequence Detail 876 Not Applicable 

For the selected sequences
All sequences(24) RefSeq(9) UniProt(1)
Polymorphisms SNPs within 2kb(222 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
Protein Ontology PR:000032324 coiled-coil domain-containing protein lobo homolog
Graphical View of Protein Domain Structure
References (Earliest) J:113018 Ma Q, et al., Molecular cloning and characterization of SRG-L, a novel mouse gene developmentally expressed in spermatogenic cells. Mol Reprod Dev. 2006 Sep;73(9):1075-83
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(22)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory