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Zscan30 Gene Detail
Summary
  • Symbol
    Zscan30
  • Name
    zinc finger and SCAN domain containing 30
  • Synonyms
    C230097I24Rik, Zfp397os
Location &
Maps
more
  • Sequence Map
    Chr18:23966680-23987226 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 18, 12.47 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    400 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2685600
protein coding gene Chr18:23932540-23987354 (-)
129S1/SvImJ MGP_129S1SvImJ_G0024195
protein coding gene Chr18:21685571-21694058 (-)
A/J MGP_AJ_G0024160
protein coding gene Chr18:21101846-21112075 (-)
AKR/J MGP_AKRJ_G0024129
protein coding gene Chr18:21743812-21750740 (-)
BALB/cJ MGP_BALBcJ_G0024160
protein coding gene Chr18:21148600-21155442 (-)
C3H/HeJ MGP_C3HHeJ_G0023928
protein coding gene Chr18:21664462-21671162 (-)
C57BL/6NJ MGP_C57BL6NJ_G0024602
protein coding gene Chr18:22621169-22630075 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0022044
protein coding gene Chr18:20973345-20984254 (-)
CAST/EiJ MGP_CASTEiJ_G0023402
protein coding gene Chr18:21456966-21457834 (-)
CBA/J MGP_CBAJ_G0023896
protein coding gene Chr18:23217917-23228904 (-)
DBA/2J MGP_DBA2J_G0024028
protein coding gene Chr18:20779407-20786937 (-)
FVB/NJ MGP_FVBNJ_G0023994
protein coding gene Chr18:20527227-20537770 (-)
LP/J MGP_LPJ_G0024109
protein coding gene Chr18:21859286-21867798 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0024022
protein coding gene Chr18:24247992-24258113 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0024650
protein coding gene Chr18:21500264-21506894 (-)
PWK/PhJ MGP_PWKPhJ_G0023146
protein coding gene Chr18:20903053-20916841 (-)
SPRET/EiJ MGP_SPRETEiJ_G0022955
protein coding gene Chr18:21730114-21737029 (-)
WSB/EiJ MGP_WSBEiJ_G0023466
protein coding gene Chr18:21397288-21403508 (-)



Homology
more
  • Human Ortholog
    ZSCAN30, zinc finger and SCAN domain containing 30
  • Vertebrate Orthologs
    7
  • Human Ortholog
    ZSCAN30, zinc finger and SCAN domain containing 30
    Orthology source: HomoloGene, HGNC
  • Synonyms
    ZNF397OS, ZNF917, ZNF-WYM
  • Links
    NCBI Gene ID: 100101467
    neXtProt AC: NX_Q86W11
    UniProt: Q86W11

  • Chr Location
    18q12.2; chr18:35251058-35290261 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000024274 Ensembl Gene Model | MGI Sequence Detail 20547 C57BL/6J ±  kb
transcript ENSMUST00000224144 Ensembl | MGI Sequence Detail 1458 Not Applicable  
polypeptide Q149X8 UniProt | EBI | MGI Sequence Detail 152 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 11
    cDNA 11

    Microarray probesets 1
References
more
  • Summaries
    All 17
    Developmental Gene Expression 1
    Phenotypes 2
  • Earliest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/13/2018
MGI 6.13
The Jackson Laboratory