4930407I10Rik Gene Detail

Summary

• Symbol
  4930407I10Rik
• Name
  RIKEN cDNA 4930407I10 gene
• Synonyms
  LOC328573

• Feature Type
  protein coding gene
• IDs
  MGI:2685593
  NCBI Gene: 328573

Location & Maps

• Sequence Map
  Chr15:82059151-82066538 bp, + strand
• From NCBI annotation of GRCm38
  

  Mouse Genome Browser
  
  

• Download
  Sequence
    7388 bp   ±  kb flank
  
  
• Genome Browsers
  VEGA | Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, 38.40 cM
• Mapping Data
  1 experiment

Homology

• Human Ortholog
  C22orf46, chromosome 22 open reading frame 46

• Vertebrate Orthologs
  4

• Human Ortholog
  C22orf46, chromosome 22 open reading frame 46
  Orthology source: HGNC
• Links
  HGNC:26294

  NCBI Gene ID: 79640

  neXtProt AC: NX_C9J442

  UniProt: C9J442

  
  
• Chr Location
  22q13.2; chr22:41688939-41698136 (+)  GRCh38.p7

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• HomoloGene
  Vertebrate Homology Class 130065
  1 mouse;1 rat;1 cattle;1 dog
  
• HCOP
  human homology predictions: C22orf46
• Gene Tree
  4930407I10Rik
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  19 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  1
• Radiation induced
  2
• Genomic Mutations
  3 involving 4930407I10Rik
• Incidental Mutations
  Mutagenetix , APF , CvDC
• Find Mice (IMSR)
  16 strains or lines available

Gene Ontology
(GO)
Classifications

• External Resources
  FuncBase

Expression

• cDNA Data
  5

• Other Mouse Links
  Allen Institute
  GEO
  Expression Atlas

Interactions

• 4930407I10Rik interacts with 48 markers (Mir15a, Mir24-1, Mir24-2, ...) View All

Sequences &
Gene Models

• All Sequences
  11
• RefSeq
  3
• UniProt
  1
• CCDS
  CCDS49678.1
• UniGene
  399189

• Ensembl
  ENSMUSG00000075524 (Evidence)
• NCBI Gene
  328573

Representative Sequences			Length	Strain/Species
genomic	328573	NCBI Gene Model | MGI Sequence Detail	7388	C57BL/6J
transcript	NM_001166475	RefSeq | MGI Sequence Detail	4673	C57BL/6
polypeptide	NP_001159947	RefSeq | MGI Sequence Detail	1512	C57BL/6

Polymorphisms

• SNPs within 2kb
  54 from dbSNP Build 142

Protein
Information

• UniProt
  1 Sequence
• InterPro Domains
  IPR031715 Protein of unknown function DUF4727

Molecular
Reagents

• All nucleic 5

  cDNA 5

  
  

  Microarray probesets 3

References

• Summaries
  All 34

  Diseases 1

  Phenotypes 19
• Earliest
  J:13437 Bangham JW, Hairy ears, Eh. Mouse News Lett. 1965;33:68
• Latest
  J:233611 Hirata A, et al., Homeobox family Hoxc localization during murine palate formation. Congenit Anom (Kyoto). 2016 Jul;56(4):172-9