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Hsf5 Gene Detail
Summary
  • Symbol
    Hsf5
  • Name
    heat shock transcription factor family member 5
  • Synonyms
    LOC327992
  • Feature Type
    protein coding gene
  • IDs
    MGI:2685585
    NCBI Gene: 327992
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:87617164-87659542 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 52.16 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    74 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2685585
protein coding gene Chr11:87616387-87659886 (.)
129S1/SvImJ MGP_129S1SvImJ_G0018908
protein coding gene Chr11:89244858-89291030 (+)
A/J MGP_AJ_G0018875
protein coding gene Chr11:85800492-85843478 (+)
AKR/J MGP_AKRJ_G0018845
protein coding gene Chr11:88369793-88412080 (+)
BALB/cJ MGP_BALBcJ_G0018848
protein coding gene Chr11:86198025-86241383 (+)
C3H/HeJ MGP_C3HHeJ_G0018662
protein coding gene Chr11:88408869-88451104 (+)
C57BL/6NJ MGP_C57BL6NJ_G0019300
protein coding gene Chr11:91949849-91992066 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0016933
protein coding gene Chr11:82830213-82873165 (+)
CAST/EiJ MGP_CASTEiJ_G0018217
protein coding gene Chr11:89099111-89143785 (+)
CBA/J MGP_CBAJ_G0018633
protein coding gene Chr11:95807457-95855001 (+)
DBA/2J MGP_DBA2J_G0018741
protein coding gene Chr11:85354785-85397400 (+)
FVB/NJ MGP_FVBNJ_G0018730
protein coding gene Chr11:84862295-84905469 (+)
LP/J MGP_LPJ_G0018811
protein coding gene Chr11:89735341-89777657 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0018757
protein coding gene Chr11:95862813-95910776 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0019340
protein coding gene Chr11:88608555-88652571 (+)
PWK/PhJ MGP_PWKPhJ_G0017987
protein coding gene Chr11:86202543-86245826 (+)
SPRET/EiJ MGP_SPRETEiJ_G0017780
protein coding gene Chr11:88172637-88217305 (+)
WSB/EiJ MGP_WSBEiJ_G0018268
protein coding gene Chr11:88489674-88534878 (+)



Homology
more
  • Human Ortholog
    HSF5, heat shock transcription factor 5
  • Vertebrate Orthologs
    9
  • Human Ortholog
    HSF5, heat shock transcription factor 5
    Orthology source: HomoloGene, HGNC
  • Synonyms
    HSF 5, HSTF 5
  • Links
    NCBI Gene ID: 124535
    neXtProt AC: NX_Q4G112
    UniProt: Q4G112

  • Chr Location
    17q22; chr17:58420167-58488401 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000070345 Ensembl Gene Model | MGI Sequence Detail 42379 C57BL/6J ±  kb
transcript ENSMUST00000093956 Ensembl | MGI Sequence Detail 4158 Not Applicable  
polypeptide ENSMUSP00000091488 Ensembl | MGI Sequence Detail 624 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 8
    cDNA 7
    Primer pair 1

    Microarray probesets 2
References
more
  • Summaries
    All 30
    Developmental Gene Expression 2
    Gene Ontology 4
    Phenotypes 8
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/13/2018
MGI 6.13
The Jackson Laboratory