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Spaca5 Gene Detail
Summary
  • Symbol
    Spaca5
  • Name
    sperm acrosome associated 5
  • Synonyms
    LOC278203
  • Feature Type
    protein coding gene
  • IDs
    MGI:2685564
    NCBI Gene: 278203
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:21068488-21077959 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome X, 16.59 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    6 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2685564
protein coding gene ChrX:21068406-21077963 (+)
129S1/SvImJ MGP_129S1SvImJ_G0035604
protein coding gene ChrX:15980172-15983947 (+)
A/J MGP_AJ_G0035581
protein coding gene ChrX:16065155-16070181 (+)
AKR/J MGP_AKRJ_G0035514
protein coding gene ChrX:16613925-16623482 (+)
BALB/cJ MGP_BALBcJ_G0035574
protein coding gene ChrX:15830468-15834493 (+)
C3H/HeJ MGP_C3HHeJ_G0035292
protein coding gene ChrX:16191539-16195461 (+)
C57BL/6NJ MGP_C57BL6NJ_G0036110
protein coding gene ChrX:16413180-16419698 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0032974
protein coding gene ChrX:14310597-14314680 (+)
CAST/EiJ MGP_CASTEiJ_G0034583
protein coding gene ChrX:15494060-15498365 (+)
CBA/J MGP_CBAJ_G0035261
protein coding gene ChrX:17145304-17152108 (+)
DBA/2J MGP_DBA2J_G0035413
protein coding gene ChrX:15856821-15861471 (+)
FVB/NJ MGP_FVBNJ_G0035359
protein coding gene ChrX:15761596-15765547 (+)
LP/J MGP_LPJ_G0035495
protein coding gene ChrX:16241756-16248633 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0035403
protein coding gene ChrX:17398260-17403332 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0036117
protein coding gene ChrX:15907895-15917452 (+)
PWK/PhJ MGP_PWKPhJ_G0034284
protein coding gene ChrX:15067486-15071902 (+)
SPRET/EiJ MGP_SPRETEiJ_G0034124
protein coding gene ChrX:15905680-15910347 (+)
WSB/EiJ MGP_WSBEiJ_G0034718
protein coding gene ChrX:15757927-15763312 (+)



Homology
more
  • Human Ortholog
    SPACA5, sperm acrosome associated 5
  • Vertebrate Orthologs
    8
  • Human Ortholog
    SPACA5, sperm acrosome associated 5
    Orthology source: HomoloGene, HGNC
  • Synonyms
    LYC5, LYZL5, PNPK6288, SLLP2, SLLP-X, UNQ6288
  • Links
    NCBI Gene ID: 389852
    neXtProt AC: NX_Q96QH8
    UniProt: Q96QH8

  • Chr Location
    Xp11.23; chrX:48004336-48009736 (+)  GRCh38.p7

  • Human Ortholog
    SPACA5B, sperm acrosome associated 5B
    Orthology source: HomoloGene, HGNC
  • Synonyms
    LYZL5B
  • Links
    NCBI Gene ID: 729201
    neXtProt AC: NX_Q96QH8
    UniProt: Q96QH8

  • Chr Location
    Xp11.23; chrX:48130657-48132613 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 278203 NCBI Gene Model | MGI Sequence Detail 9472 C57BL/6J ±  kb
transcript NM_001085393 RefSeq | MGI Sequence Detail 611 C57BL/6  
polypeptide A2AE20 UniProt | EBI | MGI Sequence Detail 160 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less

  • Microarray probesets 1
References
more
  • Summaries
    All 13
    Gene Ontology 4
    Phenotypes 1
  • Earliest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
05/26/2020
MGI 6.15
The Jackson Laboratory