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Lkaaear1 Gene Detail
Summary
  • Symbol
    Lkaaear1
  • Name
    LKAAEAR motif containing 1 (IKAAEAR murine motif)
  • Synonyms
    4930526D03Rik, LOC277496
  • Feature Type
    protein coding gene
  • IDs
    MGI:2685538
    NCBI Gene: 277496
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:181696793-181698442 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 103.73 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    18 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2685538
 protein coding gene Chr2:181696793-181698442 (-)
129S1/SvImJ MGP_129S1SvImJ_G0027035
 protein coding gene Chr2:188319529-188321190 (-)
A/J MGP_AJ_G0027001
 protein coding gene Chr2:180552317-180553966 (-)
AKR/J MGP_AKRJ_G0026971
 protein coding gene Chr2:185969074-185970723 (-)
BALB/cJ MGP_BALBcJ_G0027009
 protein coding gene Chr2:181032917-181034566 (-)
C3H/HeJ MGP_C3HHeJ_G0026751
 protein coding gene Chr2:186313121-186314770 (-)
C57BL/6NJ MGP_C57BL6NJ_G0027455
 protein coding gene Chr2:193757785-193759434 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0024819
 protein coding gene Chr2:171234639-171237145 (-)
CAST/EiJ MGP_CASTEiJ_G0026210
 protein coding gene Chr2:184592198-184593853 (-)
CBA/J MGP_CBAJ_G0026728
 protein coding gene Chr2:200780739-200782400 (-)
DBA/2J MGP_DBA2J_G0026865
 protein coding gene Chr2:179654700-179656349 (-)
FVB/NJ MGP_FVBNJ_G0026831
 protein coding gene Chr2:178275050-178276699 (-)
LP/J MGP_LPJ_G0026967
 protein coding gene Chr2:188337052-188338713 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0026851
 protein coding gene Chr2:203331685-203333346 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0027515
 protein coding gene Chr2:185945015-185946664 (-)
PWK/PhJ MGP_PWKPhJ_G0025946
 protein coding gene Chr2:177184896-177186545 (-)
SPRET/EiJ MGP_SPRETEiJ_G0025746
 protein coding gene Chr2:182436028-182437686 (-)
WSB/EiJ MGP_WSBEiJ_G0026282
 protein coding gene Chr2:186928268-186929917 (-)



Homology
more
  • Human Ortholog
    LKAAEAR1, LKAAEAR motif containing 1
  • Vertebrate Orthologs
    5
  • Human Ortholog
    LKAAEAR1, LKAAEAR motif containing 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C20orf201
  • Links
    NCBI Gene ID: 198437
    neXtProt AC: NX_Q8TD35
    UniProt: Q8TD35

  • Chr Location
    20q13.33; chr20:64083375-64084956 (-)  GRCh38.p7
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    631
  • cDNA Data
    7
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000045794 Ensembl Gene Model | MGI Sequence Detail 1650 C57BL/6J ±  kb
transcript ENSMUST00000052416 Ensembl | MGI Sequence Detail 718 Not Applicable  
polypeptide ENSMUSP00000061134 Ensembl | MGI Sequence Detail 198 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR029152 Protein LKAAEAR1
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 2
References
more
  • Summaries
    All 17
    Phenotypes 1
  • Earliest
    J:162220 Magdaleno S, et al., BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. PLoS Biol. 2006 Apr;4(4):e86
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
07/29/2020
MGI 6.15 		The Jackson Laboratory