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Gm648 Gene Detail
Summary
  • Symbol
    Gm648
  • Name
    predicted gene 648
  • Synonyms
    LOC270599
  • Feature Type
    protein coding gene
  • IDs
    MGI:2685494
    NCBI Gene: 270599
  • Alliance
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:56543874-56549606 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome X, 30.06 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    40 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2685494
protein coding gene ChrX:56543873-56569162 (-)
129S1/SvImJ MGP_129S1SvImJ_G0035737
protein coding gene ChrX:51834327-51839864 (-)
A/J MGP_AJ_G0035720
protein coding gene ChrX:52027545-52033277 (-)
AKR/J MGP_AKRJ_G0035640
protein coding gene ChrX:53409318-53415052 (-)
BALB/cJ MGP_BALBcJ_G0035707
protein coding gene ChrX:51496526-51502258 (-)
C3H/HeJ MGP_C3HHeJ_G0035409
protein coding gene ChrX:52372153-52378030 (-)
C57BL/6NJ MGP_C57BL6NJ_G0036236
protein coding gene ChrX:53223996-53229886 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0033087
protein coding gene ChrX:51478985-51484789 (-)
CAST/EiJ MGP_CASTEiJ_G0034702
protein coding gene ChrX:38261171-38266615 (-)
CBA/J MGP_CBAJ_G0035384
protein coding gene ChrX:54769193-54778221 (-)
DBA/2J MGP_DBA2J_G0035538
protein coding gene ChrX:51630699-51637071 (-)
FVB/NJ MGP_FVBNJ_G0035488
protein coding gene ChrX:51231144-51236859 (-)
LP/J MGP_LPJ_G0035626
protein coding gene ChrX:52429667-52435399 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0035524
protein coding gene ChrX:56309179-56314714 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0036252
protein coding gene ChrX:51869095-51874622 (-)
PWK/PhJ MGP_PWKPhJ_G0034398
protein coding gene ChrX:36535748-36541696 (-)
SPRET/EiJ MGP_SPRETEiJ_G0034242
protein coding gene ChrX:38988554-38994169 (-)
WSB/EiJ MGP_WSBEiJ_G0034845
protein coding gene ChrX:51403527-51411515 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotypes from 1 allele in 1 genetic background
    4 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000064016 Ensembl Gene Model | MGI Sequence Detail 5733 C57BL/6J ±  kb
transcript ENSMUST00000081133 Ensembl | MGI Sequence Detail 1040 Not Applicable  
polypeptide ENSMUSP00000079908 Ensembl | MGI Sequence Detail 213 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR029307 INTS6/SAGE1/DDX26B/CT45, C-terminal
Molecular
Reagents
less
  • All nucleic 11
    cDNA 11

    Microarray probesets 1
References
more
  • Summaries
    All 16
    Phenotypes 4
  • Earliest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/15/2019
MGI 6.14
The Jackson Laboratory